Mir
Gene
DB
2.1
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112 microRNA genes with seed CCCUGUA
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
▲
3' NTU
UG
UGUG
CNNC
Dno-Mir-10-P1b-v2
dno-mir-10b
MIR-10
CCCUGUA
MIMAT0047499
MIMAT0047500
JH575655
3701010
3701069
+
Gnathostomata
Eumetazoa
No
Dre-Mir-10-P1b1-v2
dre-mir-10b-1
MIR-10
CCCUGUA
MIMAT0001268
MIMAT0031919
chr9
1952964
1953023
-
Clupeocephala
Eumetazoa
No
Sha-Mir-10-P1b-v2
sha-mir-10b
MIR-10
CCCUGUA
MIMAT0022799
None
GL849635.1
2022372
2022431
+
Gnathostomata
Eumetazoa
No
Dsi-Mir-10-P1
dsi-mir-10
MIR-10
CCCUGUA
MIMAT0008887
None
3R
2529742
2529804
-
Bilateria
Eumetazoa
No
1
Dre-Mir-10-P1d1-v2
dre-mir-10b-2
MIR-10
CCCUGUA
MIMAT0001268
MIMAT0031934
chr23
36130017
36130077
+
Clupeocephala
Eumetazoa
Unknown
Aae-Mir-10-P1-v1
aae-mir-10
MIR-10
CCCUGUA
MIMAT0014277
None
supercont1.440
813557
813619
+
Bilateria
Eumetazoa
No
Cpo-Mir-10-P1c-v2
cpo-mir-10a
MIR-10
CCCUGUA
MIMAT0046845
MIMAT0046846
scaffold_53
8675060
8675120
+
Gnathostomata
Eumetazoa
No
1
Cmi-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
KI635976.1
1292316
1292376
+
Gnathostomata
Eumetazoa
No
1
Dma-Mir-10-P1-v1
None
MIR-10
CCCUGUA
None
None
NC_046178.1
8231923
8231981
+
Bilateria
Eumetazoa
No
1
Csc-Mir-10-P1q3
None
MIR-10
CCCUGUA
None
None
NW_019384341.1
336262
336320
-
C. sculpturatus
Eumetazoa
Unknown
1
Lpo-Mir-10-P1n-v1
None
MIR-10
CCCUGUA
None
None
NW_013668646.1
77832
77889
-
L. polyphemus
Eumetazoa
No
1
Tni-Mir-10-P1b1-v2
tni-mir-10b-2
MIR-10
CCCUGUA
MIMAT0002964
None
2
13424291
13424350
-
Clupeocephala
Eumetazoa
Unknown
Ami-Mir-10-P1d-v2
ami-mir-10c
MIR-10
CCCUGUA
MIMAT0038034
MIMAT0038035
NW_017708254.1
346318
346377
+
Gnathostomata
Eumetazoa
No
Mml-Mir-10-P1b-v2
mml-mir-10b
MIR-10
CCCUGUA
MIMAT0006162
MIMAT0026798
chr12
63173274
63173333
+
Gnathostomata
Eumetazoa
No
Oan-Mir-10-P1b-v2
oan-mir-10b
MIR-10
CCCUGUA
MIMAT0007218
MIMAT0007219
NC_041736.1
19531514
19531573
+
Gnathostomata
Eumetazoa
No
Gga-Mir-10-P1d-v2
None
MIR-10
CCCUGUA
None
None
None
None
None
None
Gnathostomata
Eumetazoa
No
Tgu-Mir-10-P1b-v2
tgu-mir-10a
MIR-10
CCCUGUA
MIMAT0018618
MIMAT0027035
7
16417454
16417513
+
Gnathostomata
Eumetazoa
No
Cfa-Mir-10-P1c-v2
cfa-mir-10a
MIR-10
CCCUGUA
MIMAT0006737
None
chr9
24842172
24842232
-
Gnathostomata
Eumetazoa
No
1
Mal-Mir-10-P1c2a-v2
None
MIR-10
CCCUGUA
None
None
KV884755.1
566953
567013
-
M. albus
Eumetazoa
Unknown
1
1
Xtr-Mir-10-P1b-v2
xtr-mir-10b
MIR-10
CCCUGUA
MIMAT0003558
None
chr9
59969715
59969772
+
Gnathostomata
Eumetazoa
No
Csc-Mir-10-P1r
None
MIR-10
CCCUGUA
None
None
NW_019384862.1
289996
290055
+
C. sculpturatus
Eumetazoa
Unknown
Mun-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
10-P1d-v1_LR594643.1:63956865-63957127
102
162
+
Gnathostomata
Eumetazoa
No
1
Aca-Mir-10-P1b-v2
aca-mir-10b
MIR-10
CCCUGUA
MIMAT0021719
MIMAT0021720
GL343356.1
481997
482056
-
Gnathostomata
Eumetazoa
No
Pbv-Mir-10-P1c-v2
pbv-mir-10a
MIR-10
CCCUGUA
MIMAT0038824
MIMAT0038825
KE955436.1
47290
47349
+
Gnathostomata
Eumetazoa
No
1
Gmo-Mir-10-P1b1-v2
gmo-mir-10a-1
MIR-10
CCCUGUA
MIMAT0044088
MIMAT0044089
GeneScaffold_1009
374096
374156
-
Clupeocephala
Eumetazoa
No
1
Gja-Mir-10-P1d-v2
None
MIR-10
CCCUGUA
None
None
NW_015167536.1
410035
410092
-
Gnathostomata
Eumetazoa
Unknown
Gmo-Mir-10-P1d1-v2
gmo-mir-10a-2
MIR-10
CCCUGUA
MIMAT0044088
None
GeneScaffold_1797
154031
154090
+
Clupeocephala
Eumetazoa
No
Xla-Mir-10-P1c3-v2
xla-mir-10a
MIR-10
CCCUGUA
MIMAT0046422
MIMAT0046423
NC_030740.1
3499573
3499632
-
X. laevis
Eumetazoa
No
1
Dno-Mir-10-P1c-v2
dno-mir-10a
MIR-10
CCCUGUA
MIMAT0047497
MIMAT0047498
JH562571
188562
188622
-
Gnathostomata
Eumetazoa
No
1
Dre-Mir-10-P1b2-v2
dre-mir-10d
MIR-10
CCCUGUA
MIMAT0001771
MIMAT0003394
chr6
10867052
10867111
+
Clupeocephala
Eumetazoa
No
Sha-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
GL856828.1
1035015
1035075
-
Gnathostomata
Eumetazoa
No
1
Dya-Mir-10-P1
dya-mir-10
MIR-10
CCCUGUA
MIMAT0009082
None
3R
7778013
7778075
+
Bilateria
Eumetazoa
No
1
Loc-Mir-10-P1b-v2
None
MIR-10
CCCUGUA
None
None
LG12
15544685
15544744
-
Gnathostomata
Eumetazoa
No
Rno-Mir-10-P1b-v2
rno-mir-10b
MIR-10
CCCUGUA
MIMAT0000783
MIMAT0017092
chr3
61648004
61648063
+
Gnathostomata
Eumetazoa
No
Sto-Mir-10-P1b-v2
None
MIR-10
CCCUGUA
None
None
BFAA01001523.1
62107
62163
-
Gnathostomata
Eumetazoa
No
Bge-Mir-10-P1-v1
None
MIR-10
CCCUGUA
None
None
KZ614729.1
496542
496599
-
Bilateria
Eumetazoa
No
1
Ocu-Mir-10-P1b-v2
ocu-mir-10b
MIR-10
CCCUGUA
MIMAT0048099
MIMAT0048100
chr7
115709576
115709635
+
Gnathostomata
Eumetazoa
No
Cmi-Mir-10-P1d-v2
None
MIR-10
CCCUGUA
None
None
KI636119.1
284356
284415
+
Gnathostomata
Eumetazoa
No
Lpo-Mir-10-P1k-v1
None
MIR-10
CCCUGUA
None
None
NW_013666572.1
345853
345911
+
L. polyphemus
Eumetazoa
No
1
Lpo-Mir-10-P1o-v1
None
MIR-10
CCCUGUA
None
None
NW_013678333.1
8113
8170
+
L. polyphemus
Eumetazoa
No
1
Cpi-Mir-10-P1b-v2
cpi-mir-10b
MIR-10
CCCUGUA
MIMAT0037627
MIMAT0037628
JH584712
2217469
2217528
+
Gnathostomata
Eumetazoa
No
Mml-Mir-10-P1c-v2
mml-mir-10a
MIR-10
CCCUGUA
MIMAT0006161
MIMAT0026797
chr16
41307387
41307447
+
Gnathostomata
Eumetazoa
No
1
Oan-Mir-10-P1c-v2
oan-mir-10a
MIR-10
CCCUGUA
MIMAT0007122
MIMAT0007123
NC_041738.1
58283265
58283325
-
Gnathostomata
Eumetazoa
No
1
Hme-Mir-10-P1-v1
hme-mir-10
MIR-10
CCCUGUA
MIMAT0024932
None
HE667778
152725
152782
-
Bilateria
Eumetazoa
No
1
Cli-Mir-10-P1b-v2
cli-mir-10b
MIR-10
CCCUGUA
MIMAT0038406
MIMAT0038407
scaffold893
612556
612615
-
Gnathostomata
Eumetazoa
No
Tgu-Mir-10-P1c-v2
tgu-mir-10a
MIR-10
CCCUGUA
MIMAT0018618
MIMAT0027035
gnl|ti|1257183866
638
698
+
Gnathostomata
Eumetazoa
No
Isc-Mir-10-P1-v1
isc-mir-10
MIR-10
CCCUGUA
MIMAT0012682
None
DS891538
2780820
2780877
+
Bilateria
Eumetazoa
No
1
Bta-Mir-10-P1b-v2
bta-mir-10b
MIR-10
CCCUGUA
MIMAT0003839
None
NC_037329.1
20762762
20762821
-
Gnathostomata
Eumetazoa
No
Mal-Mir-10-P1c2b-v2
None
MIR-10
CCCUGUA
None
None
KV884755.1
546073
546133
-
M. albus
Eumetazoa
Unknown
1
1
Xtr-Mir-10-P1c-v2
xtr-mir-10a
MIR-10
CCCUGUA
MIMAT0003557
None
chr10
5060953
5061013
-
Gnathostomata
Eumetazoa
No
1
1
Mun-Mir-10-P1d-v2
None
MIR-10
CCCUGUA
None
None
10-P1c-v2_LR594634.1:315264575-315264716
42
101
-
Gnathostomata
Eumetazoa
Unknown
Aca-Mir-10-P1c-v2
aca-mir-10a
MIR-10
CCCUGUA
MIMAT0021717
MIMAT0021718
6
75570728
75570787
-
Gnathostomata
Eumetazoa
No
1
Tni-Mir-10-P1c1-v2
tni-mir-10c
MIR-10
CCCUGUA
MIMAT0003088
None
Un_random
5507316
5507379
-
Clupeocephala
Eumetazoa
No
1
Pbv-Mir-10-P1d-v2
pbv-mir-10b-2
MIR-10
CCCUGUA
MIMAT0038826
MIMAT0038828
KE953310.1
36710
36767
+
Gnathostomata
Eumetazoa
No
Gmo-Mir-10-P1b2-v2
gmo-mir-10b
MIR-10
CCCUGUA
MIMAT0044188
None
GeneScaffold_2339
30813
30869
+
Clupeocephala
Eumetazoa
Unknown
1
Xla-Mir-10-P1c4-v2
None
MIR-10
CCCUGUA
None
None
NC_030741.1
3133740
3133799
-
X. laevis
Eumetazoa
No
1
Ete-Mir-10-P1b-v2
None
MIR-10
CCCUGUA
None
None
JH980302
1714259
1714318
+
Gnathostomata
Eumetazoa
No
Dre-Mir-10-P1c1-v2
dre-mir-10c
MIR-10
CCCUGUA
MIMAT0001770
MIMAT0031935
chr3
23720667
23720727
+
Clupeocephala
Eumetazoa
No
1
Mdo-Mir-10-P1b-v2
mdo-mir-10b
MIR-10
CCCUGUA
MIMAT0004090
MIMAT0026649
4
187496051
187496110
+
Gnathostomata
Eumetazoa
No
Dan-Mir-10-P1
dan-mir-10
MIR-10
CCCUGUA
MIMAT0008476
None
scaffold_13340
5417376
5417438
+
Bilateria
Eumetazoa
No
1
Loc-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
LG15
9188974
9189034
-
Gnathostomata
Eumetazoa
No
1
Rno-Mir-10-P1c-v2
rno-mir-10a
MIR-10
CCCUGUA
MIMAT0000782
MIMAT0004709
chr10
84165972
84166032
+
Gnathostomata
Eumetazoa
No
1
Sto-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
BFAA01000145.1
326956
327016
-
Gnathostomata
Eumetazoa
No
1
Ocu-Mir-10-P1c-v2
ocu-mir-10a
MIR-10
CCCUGUA
MIMAT0048097
MIMAT0048098
chr19
38782600
38782660
+
Gnathostomata
Eumetazoa
No
1
Lpo-Mir-10-P1l-v1
None
MIR-10
CCCUGUA
None
None
NW_013665747.1
245823
245879
-
L. polyphemus
Eumetazoa
No
Lpo-Mir-10-P1p-v1
None
MIR-10
CCCUGUA
None
None
NW_013668868.1
9884
9943
-
L. polyphemus
Eumetazoa
No
Mal-Mir-10-P1b1-v2
None
MIR-10
CCCUGUA
None
None
KV884718.1
892127
892186
+
Clupeocephala
Eumetazoa
Unknown
Bta-Mir-10-P1c-v2
bta-mir-10a
MIR-10
CCCUGUA
MIMAT0003786
None
NC_037346.1
37912325
37912385
+
Gnathostomata
Eumetazoa
No
1
Hsa-Mir-10-P1b-v2
hsa-mir-10b
MIR-10
CCCUGUA
MIMAT0000254
MIMAT0004556
chr2
176150330
176150389
+
Gnathostomata
Eumetazoa
No
Mmu-Mir-10-P1b-v2
mmu-mir-10b
MIR-10
CCCUGUA
MIMAT0000208
MIMAT0004538
chr2
74726075
74726134
+
Gnathostomata
Eumetazoa
No
Gga-Mir-10-P1b-v2
gga-mir-10b
MIR-10
CCCUGUA
MIMAT0001148
MIMAT0026521
7
16278930
16278989
-
Gnathostomata
Eumetazoa
No
Cli-Mir-10-P1c-v2
cli-mir-10a
MIR-10
CCCUGUA
MIMAT0038404
MIMAT0038405
scaffold265
1564494
1564553
+
Gnathostomata
Eumetazoa
No
1
Dpu-Mir-10-P1-v1
dpu-mir-10
MIR-10
CCCUGUA
MIMAT0012636
None
DAPPUscaffold_7
304826
304884
-
Bilateria
Eumetazoa
No
1
Ami-Mir-10-P1b-v2
ami-mir-10b
MIR-10
CCCUGUA
MIMAT0038032
MIMAT0038033
NW_017714267.1
6396789
6396848
-
Gnathostomata
Eumetazoa
No
Mal-Mir-10-P1d1-v2
None
MIR-10
CCCUGUA
None
None
KV884694.1
1805181
1805240
-
Clupeocephala
Eumetazoa
No
Xtr-Mir-10-P1d-v2
xtr-mir-10c
MIR-10
CCCUGUA
MIMAT0003559
None
chr2
142821737
142821793
-
Gnathostomata
Eumetazoa
No
Cpi-Mir-10-P1c-v2
cpi-mir-10a
MIR-10
CCCUGUA
MIMAT0037625
MIMAT0037626
JH584731
2427011
2427070
-
Gnathostomata
Eumetazoa
Unknown
1
Aca-Mir-10-P1d-v2
aca-mir-10c
MIR-10
CCCUGUA
MIMAT0021721
MIMAT0021722
2
71991632
71991689
-
Gnathostomata
Eumetazoa
No
Tni-Mir-10-P1c2-v2
None
MIR-10
CCCUGUA
None
None
2
1745677
1745737
-
Clupeocephala
Eumetazoa
Unknown
1
1
Gja-Mir-10-P1b-v2
None
MIR-10
CCCUGUA
None
None
NW_015165302.1
170054
170113
-
Gnathostomata
Eumetazoa
No
Gmo-Mir-10-P1c1-v2
gmo-mir-10c
MIR-10
CCCUGUA
MIMAT0044225
MIMAT0044226
GeneScaffold_3558
107635
107698
+
Clupeocephala
Eumetazoa
No
1
Xla-Mir-10-P1b3-v2
xla-mir-10b
MIR-10
CCCUGUA
MIMAT0046424
MIMAT0046425
NC_030740.1
67996929
67996988
-
X. laevis
Eumetazoa
No
Xla-Mir-10-P1d3-v2
None
MIR-10
CCCUGUA
None
None
NC_030726.1
148240764
148240820
-
X. laevis
Eumetazoa
No
Csc-Mir-10-P1q1
None
MIR-10
CCCUGUA
None
None
NW_019384341.1
354570
354628
-
C. sculpturatus
Eumetazoa
Unknown
1
Ete-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
JH980319
25189333
25189393
+
Gnathostomata
Eumetazoa
Unknown
1
Dme-Mir-10-P1
dme-mir-10
MIR-10
CCCUGUA
MIMAT0000115
MIMAT0012531
3R
6809512
6809574
-
Bilateria
Eumetazoa
No
1
Dre-Mir-10-P1c2-v2
dre-mir-10a
MIR-10
CCCUGUA
MIMAT0001267
MIMAT0003391
chr12
27134887
27134943
+
Clupeocephala
Eumetazoa
No
1
Mdo-Mir-10-P1c-v2
mdo-mir-10a
MIR-10
CCCUGUA
MIMAT0004089
MIMAT0026648
2
201156746
201156806
-
Gnathostomata
Eumetazoa
No
1
Dmo-Mir-10-P1
dmo-mir-10
MIR-10
CCCUGUA
MIMAT0008693
None
scaffold_6540
16502920
16502982
+
Bilateria
Eumetazoa
No
1
Loc-Mir-10-P1d-v2
None
MIR-10
CCCUGUA
None
None
LG4
15933792
15933850
+
Gnathostomata
Eumetazoa
No
Cpo-Mir-10-P1b-v2
cpo-mir-10b
MIR-10
CCCUGUA
MIMAT0046847
MIMAT0046848
scaffold_3
14161470
14161529
-
Gnathostomata
Eumetazoa
No
Cmi-Mir-10-P1b-v2
None
MIR-10
CCCUGUA
None
None
KI635868.1
5155563
5155619
+
Gnathostomata
Eumetazoa
No
Lpo-Mir-10-P1m-v1
None
MIR-10
CCCUGUA
None
None
NW_013666465.1
260670
260726
-
L. polyphemus
Eumetazoa
No
Ami-Mir-10-P1c-v2
ami-mir-10a
MIR-10
CCCUGUA
MIMAT0038030
MIMAT0038031
NW_017708231.1
3410198
3410257
-
Gnathostomata
Eumetazoa
No
1
Csc-Mir-10-P1q2
None
MIR-10
CCCUGUA
None
None
NW_019384341.1
345313
345371
-
C. sculpturatus
Eumetazoa
Unknown
1
Hsa-Mir-10-P1c-v2
hsa-mir-10a
MIR-10
CCCUGUA
MIMAT0000253
MIMAT0004555
chr17
48579865
48579925
-
Gnathostomata
Eumetazoa
No
1
Mmu-Mir-10-P1c-v2
mmu-mir-10a
MIR-10
CCCUGUA
MIMAT0000648
MIMAT0004659
chr11
96317187
96317247
+
Gnathostomata
Eumetazoa
No
1
Gga-Mir-10-P1c-v2
gga-mir-10a
MIR-10
CCCUGUA
MIMAT0007731
MIMAT0007732
27
6242497
6242556
+
Gnathostomata
Eumetazoa
No
1
Tca-Mir-10-P1-v1
tca-mir-10
MIR-10
CCCUGUA
MIMAT0008357
MIMAT0019101
LG2
8460384
8460441
+
Bilateria
Eumetazoa
No
1
Cli-Mir-10-P1d-v2
cli-mir-10c
MIR-10
CCCUGUA
MIMAT0038408
MIMAT0038409
scaffold922
255117
255176
+
Gnathostomata
Eumetazoa
No
Cfa-Mir-10-P1b-v2
cfa-mir-10b
MIR-10
CCCUGUA
MIMAT0009837
None
chr36
19958931
19958990
+
Gnathostomata
Eumetazoa
No
Mun-Mir-10-P1b-v2
None
MIR-10
CCCUGUA
None
None
10-P1b-v2_LR594638.1:221812833-221812974
42
101
-
Gnathostomata
Eumetazoa
Unknown
Cpi-Mir-10-P1d-v2
cpi-mir-10c
MIR-10
CCCUGUA
MIMAT0037629
MIMAT0037630
JH584844
1020367
1020426
-
Gnathostomata
Eumetazoa
No
Pbv-Mir-10-P1b-v2
pbv-mir-10b-1
MIR-10
CCCUGUA
MIMAT0038826
MIMAT0038827
KE953519.1
219089
219148
+
Gnathostomata
Eumetazoa
No
Tni-Mir-10-P1d1-v2
tni-mir-10b-1
MIR-10
CCCUGUA
MIMAT0002964
None
9
4255307
4255365
+
Clupeocephala
Eumetazoa
Unknown
Gja-Mir-10-P1c-v2
None
MIR-10
CCCUGUA
None
None
NW_015168072.1
295318
295377
+
Gnathostomata
Eumetazoa
No
1
Gmo-Mir-10-P1c2-v2
gmo-mir-10d
MIR-10
CCCUGUA
MIMAT0044307
MIMAT0044308
GeneScaffold_565
163216
163273
-
Clupeocephala
Eumetazoa
No
1
1
Xla-Mir-10-P1b4-v2
None
MIR-10
CCCUGUA
None
None
NC_030741.1
62207499
62207556
-
X. laevis
Eumetazoa
No
Mal-Mir-10-P1c1-v2
None
MIR-10
CCCUGUA
None
None
KV884780.1
273803
273866
+
Clupeocephala
Eumetazoa
Unknown
1
Xla-Mir-10-P1d4-v2
None
MIR-10
CCCUGUA
None
None
None
None
None
None
X. laevis
Eumetazoa
No
Hme-Mir-2756
hme-mir-2756
MIR-2756
CCCUGUA
MIMAT0024953
None
HE672079
296638
296695
+
H. melpomene
H. melpomene
No
1
Bta-Mir-2367
bta-mir-2367
MIR-2367
CCCUGUA
MIMAT0011909
MIMAT0011910
NC_037349.1
11368936
11368994
+
B. taurus
B. taurus
No
1
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