MirGeneDB 2.1

73 microRNA genes with seed AUGGCAC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Sha-Mir-96-P3-v1 None MIR-96 AUGGCAC None None GL861654.1 986809 986870 - Bilateria Bilateria No 1 1
Ami-Mir-96-P3-v1 ami-mir-183 MIR-96 AUGGCAC MIMAT0038196 MIMAT0038197 NW_017709854.1 28193883 28193944 + Bilateria Bilateria No 1 1
Xtr-Mir-96-P3-v1 xtr-mir-183 MIR-96 AUGGCAC MIMAT0003612 None chr3 77399664 77399725 + Bilateria Bilateria No 1 1
Tca-Mir-96-P3 tca-mir-263a MIR-96 AUGGCAC MIMAT0010093 MIMAT0019180 LG5 13500413 13500472 - Bilateria Bilateria No 1
Lpo-Mir-96-P3r None MIR-96 AUGGCAC None None NW_013665929.1 544290 544349 - L. polyphemus Bilateria Unknown 1
Loc-Mir-96-P3-v1 None MIR-96 AUGGCAC None None LG8 20420183 20420244 - Bilateria Bilateria Unknown 1 1
Asu-Mir-96-P3 asu-mir-228 MIR-96 AUGGCAC MIMAT0021503 MIMAT0021504 Scaffold583 166177 166237 - Bilateria Bilateria No
Ebu-Mir-96-P3e None MIR-96 AUGGCAC None None FYBX02009823.1 3458408 3458467 - E. burgeri Bilateria Unknown 1
Bla-Mir-96-P3 None MIR-96 AUGGCAC None None Sc0000043 398484 398542 - Bilateria Bilateria No
Dsi-Mir-96-P3 dsi-mir-263a MIR-96 AUGGCAC MIMAT0008851 None 2L 11585671 11585733 - Bilateria Bilateria No 1
Mal-Mir-96-P3a-v1 None MIR-96 AUGGCAC None None KV884729.1 3066306 3066367 - Clupeocephala Bilateria No 1 1
Hsa-Mir-96-P3-v1 hsa-mir-183 MIR-96 AUGGCAC MIMAT0000261 MIMAT0004560 chr7 129774927 129774988 - Bilateria Bilateria No 1 1
Oan-Mir-96-P3-v1 oan-mir-183 MIR-96 AUGGCAC MIMAT0006805 None NC_041737.1 47132912 47132973 - Bilateria Bilateria Unknown 1 1
Mmu-Mir-96-P3-v1 mmu-mir-183 MIR-96 AUGGCAC MIMAT0000212 MIMAT0004539 chr6 30169671 30169732 - Bilateria Bilateria No 1 1
Cpo-Mir-96-P3-v1 cpo-mir-183 MIR-96 AUGGCAC MIMAT0047050 MIMAT0047051 scaffold_11 50142394 50142455 - Bilateria Bilateria No 1 1
Cfa-Mir-96-P3-v1 cfa-mir-183 MIR-96 AUGGCAC MIMAT0006621 None chr14 7068542 7068603 + Bilateria Bilateria Yes 1 1
Lpo-Mir-96-P3s None MIR-96 AUGGCAC None None NW_013666424.1 50875 50934 + L. polyphemus Bilateria Unknown
Lgi-Mir-96-P3 lgi-mir-263b MIR-96 AUGGCAC MIMAT0009584 None LOTGIsca_71 756862 756922 + Bilateria Bilateria Unknown 1 1
Ebu-Mir-96-P3f None MIR-96 AUGGCAC None None FYBX02009661.1 1101010 1101067 - E. burgeri Bilateria Unknown 1
Sko-Mir-96-P3 sko-mir-183 MIR-96 AUGGCAC MIMAT0009631 None NW_003114962.1 34337 34398 + Bilateria Bilateria Unknown
Dya-Mir-96-P3 dya-mir-263a MIR-96 AUGGCAC MIMAT0009114 None 2L 8374846 8374908 - Bilateria Bilateria No 1
Dno-Mir-96-P3-v1 dno-mir-183 MIR-96 AUGGCAC MIMAT0047701 MIMAT0047702 JH568910 1129147 1129208 - Bilateria Bilateria No 1 1
Mdo-Mir-96-P3-v1 mdo-mir-183 MIR-96 AUGGCAC MIMAT0004146 MIMAT0026691 8 189668277 189668338 - Bilateria Bilateria No 1 1
Cpi-Mir-96-P3-v1 cpi-mir-183 MIR-96 AUGGCAC MIMAT0037800 None JH584440 1633083 1633144 + Bilateria Bilateria Unknown 1 1
Spt-Mir-96-P3 None MIR-96 AUGGCAC None None QEPC01000343.1 788658 788719 - Bilateria Bilateria Unknown 1
Mun-Mir-96-P3-v1 None MIR-96 AUGGCAC None None 96-P3-v1_LR594641.1:18222814-18223075 101 162 + Bilateria Bilateria Unknown 1
Bge-Mir-96-P3 None MIR-96 AUGGCAC None None KZ614838.1 267225 267283 - Bilateria Bilateria No 1
Lpo-Mir-96-P3t None MIR-96 AUGGCAC None None NW_013665634.1 1441897 1441956 + L. polyphemus Bilateria Unknown 1 1
Sto-Mir-96-P3-v1 None MIR-96 AUGGCAC None None BFAA01006258.1 22496 22557 - Bilateria Bilateria No 1
Cgi-Mir-96-P3 None MIR-96 AUGGCAC None None scaffold626 18351 18408 + Bilateria Bilateria No 1
Pma-Mir-96-P3o1 pma-mir-183 MIR-96 AUGGCAC MIMAT0019491 MIMAT0019492 NC_046104.1 2254548 2254609 - P. marinus Bilateria Unknown 1 1
Gga-Mir-96-P3-v1 gga-mir-183 MIR-96 AUGGCAC MIMAT0001191 None 1 1479855 1479916 - Bilateria Bilateria No 1 1
Xla-Mir-96-P3c-v1 None MIR-96 AUGGCAC None None NC_030728.1 77405965 77406026 + X. laevis Bilateria No 1 1
Dpu-Mir-96-P3 dpu-mir-263a MIR-96 AUGGCAC MIMAT0012649 None DAPPUscaffold_87 475620 475711 + Bilateria Bilateria No 1 1
Mal-Mir-96-P3b-v1 None MIR-96 AUGGCAC None None KV884693.1 180999 181060 + Clupeocephala Bilateria No 1
Lpo-Mir-96-P3u None MIR-96 AUGGCAC None None NW_013665647.1 250244 250303 - L. polyphemus Bilateria Unknown 1 1
Lan-Mir-96-P3 None MIR-96 AUGGCAC None None LFEI01000342 92452 92511 - Bilateria Bilateria Unknown 1
Pma-Mir-96-P3o2 None MIR-96 AUGGCAC None None NC_046114.1 7244256 7244315 + P. marinus Bilateria Unknown 1
Lch-Mir-96-P3 None MIR-96 AUGGCAC None None JH127218.1 516970 517031 - Bilateria Bilateria Unknown 1 1
Dma-Mir-96-P3 None MIR-96 AUGGCAC None None NC_046180.1 10114339 10114567 - Bilateria Bilateria No 1 1
Lpo-Mir-96-P3v None MIR-96 AUGGCAC None None NW_013665621.1 1346537 1346596 - L. polyphemus Bilateria Unknown 1
Bpl-Mir-96-P3 None MIR-96 AUGGCAC None None QEOQ01000331.1 32991 33060 + Bilateria Bilateria Unknown 1
Cin-Mir-96-P3 cin-mir-183 MIR-96 AUGGCAC MIMAT0006107 MIMAT0015262 HT000094.1 543640 543692 - Bilateria Bilateria No 1 1
Pfl-Mir-96-P3 None MIR-96 AUGGCAC None None LD345584.1 199276 199339 - Bilateria Bilateria Unknown 1 1
Dan-Mir-96-P3 dan-mir-263a MIR-96 AUGGCAC MIMAT0008443 None scaffold_12943 2289727 2289789 + Bilateria Bilateria No 1
Tni-Mir-96-P3a tni-mir-183 MIR-96 AUGGCAC MIMAT0003090 None 19 3385640 3385701 - Clupeocephala Bilateria Unknown 1 1
Mml-Mir-96-P3-v1 mml-mir-183 MIR-96 AUGGCAC MIMAT0002783 MIMAT0026603 chr3 155860352 155860413 - Bilateria Bilateria No 1 1
Cli-Mir-96-P3-v1 cli-mir-183 MIR-96 AUGGCAC MIMAT0038558 MIMAT0038559 scaffold121 1261591 1261652 + Bilateria Bilateria No 1 1
Rno-Mir-96-P3-v1 rno-mir-183 MIR-96 AUGGCAC MIMAT0000860 MIMAT0017141 chr4 57463591 57463652 - Bilateria Bilateria No 1 1
Pbv-Mir-96-P3-v1 pbv-mir-183 MIR-96 AUGGCAC MIMAT0038982 None KE958924.1 50061 50122 - Bilateria Bilateria Unknown 1
Ocu-Mir-96-P3-v1 ocu-mir-183 MIR-96 AUGGCAC MIMAT0048287 MIMAT0048288 chr7 14826894 14826955 + Bilateria Bilateria No 1 1
Xla-Mir-96-P3d-v1 xla-mir-183 MIR-96 AUGGCAC MIMAT0046493 MIMAT0046494 NC_030729.1 63429415 63429476 - X. laevis Bilateria No 1 1
Dmo-Mir-96-P3 dmo-mir-263a MIR-96 AUGGCAC MIMAT0008653 None scaffold_6500 16780751 16780812 + Bilateria Bilateria No
Isc-Mir-96-P3 isc-mir-263a MIR-96 AUGGCAC MIMAT0012692 None DS633978 93562 93624 + Bilateria Bilateria No 1
Cel-Mir-96-P3 cel-mir-228 MIR-96 AUGGCAC MIMAT0000283 MIMAT0020327 chrIV 5562040 5562103 + Bilateria Bilateria No
Cmi-Mir-96-P3-v1 None MIR-96 AUGGCAC None None KI635871.1 2243506 2243567 + Bilateria Bilateria No 1
Spu-Mir-96-P3 spu-mir-183 MIR-96 AUGGCAC MIMAT0009684 None AAGJ06000006.1 25936385 25936452 + Bilateria Bilateria No 1
Tni-Mir-96-P3b None MIR-96 AUGGCAC None None 13 5040154 5040215 - Clupeocephala Bilateria Unknown 1
Ete-Mir-96-P3-v1 None MIR-96 AUGGCAC None None JH980321 22675320 22675381 - Bilateria Bilateria No 1 1
Bta-Mir-96-P3-v1 bta-mir-183 MIR-96 AUGGCAC MIMAT0009245 None NC_037331.1 93596161 93596222 - Bilateria Bilateria No 1 1
Aae-Mir-96-P3 aae-mir-263a MIR-96 AUGGCAC MIMAT0014289 MIMAT0015372 supercont1.981 164960 165021 - Bilateria Bilateria No 1
Csc-Mir-96-P3w None MIR-96 AUGGCAC None None NW_019385290.1 223516 223575 + C. sculpturatus Bilateria Unknown 1
Dre-Mir-96-P3a-v1 dre-mir-183 MIR-96 AUGGCAC MIMAT0001273 MIMAT0031921 chr4 15074581 15074642 + Clupeocephala Bilateria Yes 1 1
Bfl-Mir-96-P3 bfl-mir-183 MIR-96 AUGGCAC MIMAT0009487 None NC_049983.1 18504837 18504895 + Bilateria Bilateria No
Pmi-Mir-96-P3 None MIR-96 AUGGCAC None None JH769268.1 98683 98749 + Bilateria Bilateria No 1 1
Gmo-Mir-96-P3a-v1 gmo-mir-183 MIR-96 AUGGCAC MIMAT0044261 MIMAT0044262 GeneScaffold_4098 12669 12730 + Clupeocephala Bilateria No 1 1
Tgu-Mir-96-P3 tgu-mir-183 MIR-96 AUGGCAC MIMAT0025393 None gnl|ti|1263877921 384 445 - Bilateria Bilateria No 1 1
Gja-Mir-96-P3-v1 None MIR-96 AUGGCAC None None NW_015171061.1 25415 25476 + Bilateria Bilateria Unknown 1
Hme-Mir-96-P3 hme-mir-263a MIR-96 AUGGCAC MIMAT0024949 None HE672064 563354 563413 + Bilateria Bilateria No 1
Csc-Mir-96-P3x None MIR-96 AUGGCAC None None NW_019385963.1 35887 35949 - C. sculpturatus Bilateria Unknown 1
Cbr-Mir-96-P3 cbr-mir-228 MIR-96 AUGGCAC MIMAT0000495 None IV 6041106 6041167 + Bilateria Bilateria No
Dme-Mir-96-P3 dme-mir-263a MIR-96 AUGGCAC MIMAT0000319 MIMAT0020799 2L 11953424 11953486 - Bilateria Bilateria No 1
Cpo-Mir-506-P2c cpo-mir-507c MIR-506 AUGGCAC MIMAT0047319 MIMAT0047320 scaffold_84 2771646 2771702 + C. porcellus Eutheria No 1 1

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