MirGeneDB 2.1

12 microRNA genes of family MIR-54
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Asu-Mir-54-o1 asu-mir-56 MIR-54 ACCCGUA None MIMAT0021463 C4628901 434 493 + A. suum Chromadorea No 1
Asu-Mir-54-o2 asu-mir-5358a MIR-54 ACCCGUA MIMAT0021578 MIMAT0021579 Scaffold882 8167 8228 + A. suum Chromadorea No
Asu-Mir-54-o3 asu-mir-5358b MIR-54 CAUGUUG MIMAT0021598 MIMAT0021599 Scaffold882 12067 12126 + A. suum Chromadorea No
Cel-Mir-54-P1 cel-mir-54 MIR-54 ACCCGUA MIMAT0020773 MIMAT0000025 chrX 13145011 13145076 - Caenorhabditis Chromadorea No
Cbr-Mir-54-P1a cbr-mir-54a MIR-54 ACCCGUA MIMAT0011477 MIMAT0011478 X 16963777 16963838 - C. briggsae Chromadorea No
Cbr-Mir-54-P1b-v1 cbr-mir-54b MIR-54 CGAACCU None MIMAT0011494 X 16963615 16963679 - C. briggsae Chromadorea No
Cbr-Mir-54-P1b-v2 cbr-mir-54b MIR-54 GAACCUG None MIMAT0011494 X 16963616 16963678 - C. briggsae Chromadorea No
Cbr-Mir-54-P1c cbr-mir-54d MIR-54 ACCCGUA None MIMAT0011496 X 16964087 16964152 - C. briggsae Chromadorea No
Cbr-Mir-54-P2 cbr-mir-55 MIR-54 ACCCGUA None MIMAT0001310 X 16963478 16963540 - Caenorhabditis Chromadorea No
Cel-Mir-54-P2 cel-mir-55 MIR-54 ACCCGUA MIMAT0020313 MIMAT0000026 chrX 13144842 13144902 - Caenorhabditis Chromadorea No
Cbr-Mir-54-P3 cbr-mir-56 MIR-54 ACCCGUA MIMAT0011475 MIMAT0011476 X 16963349 16963415 - Caenorhabditis Chromadorea No
Cel-Mir-54-P3 cel-mir-56 MIR-54 ACCCGUA MIMAT0000027 MIMAT0000028 chrX 13144706 13144770 - Caenorhabditis Chromadorea No

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