MirGeneDB 2.1

MirGeneDB ID

Tgu-Mir-430-P2

Family name MIR-430 (all species)
Seed AAGUGCU
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues Tgu-Mir-430-P1  Tgu-Mir-430-P3  Tgu-Mir-430-P4 
Orthologues Ami-Mir-430-P2  Bta-Mir-430-P2  Cfa-Mir-430-P2  Cli-Mir-430-P2  Cmi-Mir-430-P2  Cpi-Mir-430-P2  Cpo-Mir-430-P2  Dno-Mir-430-P2  Dre-Mir-430-o2a1  Dre-Mir-430-o2a2  Dre-Mir-430-o2a3  Dre-Mir-430-o2a4  Dre-Mir-430-o2a5  Dre-Mir-430-o2a6  Dre-Mir-430-o2a7  Dre-Mir-430-o2a8  Dre-Mir-430-o2a9  Dre-Mir-430-o2a10  Dre-Mir-430-o2a11  Dre-Mir-430-o2a12  Dre-Mir-430-o2a13  Dre-Mir-430-o2a14  Dre-Mir-430-o2b  Dre-Mir-430-o2c1  Dre-Mir-430-o2c2  Dre-Mir-430-o2c3  Dre-Mir-430-o2d1  Dre-Mir-430-o2d2  Ete-Mir-430-P2  Gga-Mir-430-P2  Hsa-Mir-430-P2  Mdo-Mir-430-P2  Mml-Mir-430-P2  Mmu-Mir-430-P2  Oan-Mir-430-P2  Ocu-Mir-430-P2  Sha-Mir-430-P2  Spt-Mir-430-P2  Sto-Mir-430-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)
4: 66548390-66548446 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCGAUUUUUAAUUUUCAAGGUCUCCCUUUGCUUUAACAUGGAGGUACCUGCUGCCUAAAAAAGUAAGUGCUUCCAUGUUUCAGUGGCGGUGGAUCCUAAUGUUCGAAGACUUCCUA
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Structure
        10         20         30        40        50        
AGCGAUUUUUAAUUUUCA-   -| UC  U UG  UU             C    GCCU 
                   AGG UC  CC U  CU  AACAUGGAGGUAC UGCU    \
                   UCC AG  GG G  GA  UUGUACCUUCGUG AUGA    A
AUCCUUCAGAAGCUUGUAA   U^ GU  C GU  CU             A    AAAA 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-430-P2_5p* (predicted)

mirBase accessionNone
Sequence
0- GCUUUAACAUGGAGGUACCUGCU -23
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Mature sequence

Tgu-Mir-430-P2_3p (predicted)

mirBase accessionNone
Sequence
34- UAAGUGCUUCCAUGUUUCAGUGG -57
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