MirGeneDB 2.1

MirGeneDB ID

Tgu-Mir-383-v2

Family name MIR-383 (all species)
Seed AGAUCAG
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-383
Paralogues Tgu-Mir-383-v1 
Orthologues Aca-Mir-383-v2  Ami-Mir-383-v2  Bta-Mir-383-v2  Cfa-Mir-383-v2  Cli-Mir-383-v2  Cpi-Mir-383-v2  Cpo-Mir-383-v2  Dno-Mir-383-v2  Ete-Mir-383-v2  Gga-Mir-383-v2  Gja-Mir-383-v2  Hsa-Mir-383-v2  Mdo-Mir-383-v2  Mml-Mir-383-v2  Mmu-Mir-383-v2  Mun-Mir-383  Oan-Mir-383-v2  Ocu-Mir-383-v2  Pbv-Mir-383-v2  Rno-Mir-383-v2  Sha-Mir-383-v2  Spt-Mir-383  Xtr-Mir-383-v2 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(TaeGut1_add)
4: 28763729-28763792 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v2)
Mir-383-v2 4: 28763729-28763792 [-] UCSC Ensembl
Mir-383-v1 4: 28763730-28763791 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAAGAGAGUUGCCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAGUAAAUAUUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACAUCUUG
Get precursor sequence
Structure
        10         20         30        40        50        60  
UGGAAGAGAGUUGCCAAGU-   C     C-| A      AA    A       UUUGAGUAA 
                    CAC UGCUC  UC GAUCAG  GGUG UUGUGGC         \
                    GUG ACGAG  AG CUGGUC  UCAC GACACCG         A
GUUCUACAUUUUCCGAUCAU   A     AA^ A      CG    -       ACGAAUUAU 
  120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-383-v2_5p

mirBase accessionMIMAT0014531
Sequence
0- CAGAUCAGAAGGUGAUUGUGGC -22
Get sequence
Star sequence

Tgu-Mir-383-v2_3p*

mirBase accessionMIMAT0026989
Sequence
43- CACAGCACUGCCUGGUCAGAA -64
Get sequence