MirGeneDB 2.1

MirGeneDB ID

Tgu-Mir-1559

Family name MIR-1559 (all species)
Seed UCGAUGC
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-1559
Paralogues
Orthologues Cli-Mir-1559  Gga-Mir-1559 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(TaeGut1_add)
7: 26224204-26224263 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGAGUGUGGGAUGCUGAGGUCUAGACUCCUUUCGAUGCUUGUAUGCUACUCCCAGGAAUGCCAACAGGAGUUCCAUGGAUGCAUCGAGCAGAGACUAUACCACUGACACCACAGCACGGA
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Structure
        10          20        30        40        50         
CGAGUGUGGGAUGCUGA--|  C   A   CU        UUG    CU     CAGGAA 
                   GGU UAG CUC  UUCGAUGC   UAUG  ACUCC      U
                   CCA AUC GAG  GAGCUACG   GUAC  UGAGG      G
AGGCACGACACCACAGUCA^  U   A   AC        UAG    CU     ACAACC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-1559_5p

mirBase accessionNone
Sequence
0- UUCGAUGCUUGUAUGCUACUCC -22
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Star sequence

Tgu-Mir-1559_3p* (predicted)

mirBase accessionMIMAT0014526
Sequence
38- AGUUCCAUGGAUGCAUCGAGCA -60
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