| MirGeneDB ID | Tgu-Mir-1451 |
|---|
| Family name |
MIR-1451 (all species) |
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| Seed |
CGCACAG |
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| Species |
Zebra finch (Taeniopygia guttata) |
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| MiRBase ID |
tgu-mir-1451
|
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| Paralogues |
|
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| Orthologues |
Cli-Mir-1451
Gga-Mir-1451
|
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| Node of Origin (locus) |
Neognathae
|
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| Node of Origin (family) |
Neognathae
|
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Genome context
(TaeGut1_add) |
3: 36306128-36306186 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CCCACCAGAGCAAGCGCAGGAGCUGCUGCCUCGCACAGGAGCAAAUUACCGCGUUCAGCUAAUCCGCAGUAACUUGCUCCUGUGAGAGGUAGCGGCUCCUGGCUCCUCCCUGCACCUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCCACCAGAGCAAGCGC--| G A C UUCAG
AGGAGCUGCUGCCUC CACAGGAGCAA UUAC GCG \
UCCUCGGCGAUGGAG GUGUCCUCGUU AAUG CGC C
UUUCCACGUCCCUCCUCGG^ A C A CUAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Tgu-Mir-1451_5p |
| mirBase accession | MIMAT0014451 |
|---|
| Sequence |
0- UCGCACAGGAGCAAAUUACCGCG -23
Get sequence
|
|---|
| Star sequence |
Tgu-Mir-1451_3p* |
| mirBase accession | MIMAT0026958 |
|---|
| Sequence |
36- CAGUAACUUGCUCCUGUGAGAGG -59
Get sequence
|
|---|
