MirGeneDB 2.1
MirGeneDB ID

Tgu-Mir-128-P1

Family name MIR-128 (all species)
Seed CACAGUG
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-128-2
Paralogues Tgu-Mir-128-P2 
Orthologues Aca-Mir-128-P1  Ami-Mir-128-P1  Bta-Mir-128-P1  Cfa-Mir-128-P1  Cli-Mir-128-P1  Cmi-Mir-128-P1  Cpi-Mir-128-P1  Cpo-Mir-128-P1  Dno-Mir-128-P1  Dre-Mir-128-P1  Ebu-Mir-128  Ete-Mir-128-P1  Gga-Mir-128-P1  Gja-Mir-128-P1  Gmo-Mir-128-P1  Hsa-Mir-128-P1  Lch-Mir-128-P1  Loc-Mir-128-P1  Mal-Mir-128-P1  Mdo-Mir-128-P1  Mml-Mir-128-P1  Mmu-Mir-128-P1  Mun-Mir-128-P1  Oan-Mir-128-P1  Ocu-Mir-128-P1  Pbv-Mir-128-P1  Pma-Mir-128-o1  Rno-Mir-128-P1  Sha-Mir-128-P1  Spt-Mir-128-P1  Sto-Mir-128-P1  Tni-Mir-128-P1  Xla-Mir-128-P1a  Xla-Mir-128-P1b  Xtr-Mir-128-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)		 2: 48641436-48641493 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUGGCCGUCGGACCCCGUGCGGCUGGAAGGGGGGCCGUUACACUGUAAGAGAGUGAGUAGCAGGUCUCACAGUGAACCGGUCUCUUUUCCUGCUGUGUCACGCCACUCCGGAUGACU
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Structure
        10          20        30        40        50        
UGUGGCCGUCGGACCCC--|UG    U             UUA      A   GAGUGA 
                   G  CGGC GGAAGGGGGGCCG   CACUGU AGA      G
                   U  GUCG CCUUUUCUCUGGC   GUGACA UCU      U
UCAGUAGGCCUCACCGCAC^GU    U             CAA      C   GGACGA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-128-P1_5p*
mirBase accessionMIMAT0026977
Sequence 
0- GGGGGCCGUUACACUGUAAGA -21
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Mature sequence

Tgu-Mir-128-P1_3p
mirBase accessionMIMAT0014513
Sequence 
37- UCACAGUGAACCGGUCUCUUU -58
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