| MirGeneDB ID | Tca-Mir-927-P1 |
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| Family name |
MIR-927 (all species) |
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| Seed |
UUAGAAU |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-927a
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| Paralogues |
Tca-Mir-927-P2
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| Orthologues |
Aae-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Hme-Mir-927-P1
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(Tcas5.2) |
LG9: 12073274-12073331 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCGGUGUCAUCCGGAGAGCCACGUUUCGGUUUAGAAUUCCUACGCUUUACCGUGUGAAAGGCUGGCAAAGCGUUUGGAUUCUGAAUCGAACCUUUGGCUGAGGCGUCGGUUUUAAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUCGGUGUCAUCCGGAG- CGU-| CU A GUGUG
AGCCA UUCGGUUUAGAAUUC ACGCUUU CC A
UCGGU AAGCUAAGUCUUAGG UGCGAAA GG A
UUAAUUUUGGCUGCGGAG UUCC^ UU C UCGGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Mature sequence |
Tca-Mir-927-P1_5p |
| mirBase accession | MIMAT0008391 |
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| Sequence |
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
|
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| Star sequence |
Tca-Mir-927-P1_3p* |
| mirBase accession | MIMAT0019131 |
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| Sequence |
36- CAAAGCGUUUGGAUUCUGAAUC -58
Get sequence
|
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