| MirGeneDB ID | Tca-Mir-11622 |
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| Family name |
MIR-11622 (all species) |
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| Seed |
AAAGGAA |
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| Species |
Red flour beetle (Tribolium castaneum) |
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| MiRBase ID |
tca-mir-11622
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
T. castaneum
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| Node of Origin (family) |
T. castaneum
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Genome context
(Tcas5.2) |
LG3: 1789933-1789990 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUACAAAAUAAAUUACUAAAUCAGUUGAUGUAAAGGAAUUGCAGGAUUGAAAUGUCUGCAGCGUUUUAGUCUUGUAAAUUCCUUUGGGUUUACUGAUAAAAAAGGGGGUGAUGGGUCU
Get precursor sequence
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| Structure | 10 20 30 40 50
CUACAAAAUAAAUUACUAA-- U G -| UGUCU
AUCAGU GAU UAAAGGAA UUGCAGGAUUGAAA \
UAGUCA UUG GUUUCCUU AAUGUUCUGAUUUU G
UCUGGGUAGUGGGGGAAAAAA U G A^ GCGAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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| Mature sequence |
Tca-Mir-11622_5p |
| mirBase accession | MIMAT0045517 |
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| Sequence |
0- UAAAGGAAUUGCAGGAUUGAAA -22
Get sequence
|
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| Star sequence |
Tca-Mir-11622_3p* |
| mirBase accession | MIMAT0045518 |
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| Sequence |
35- UUAGUCUUGUAAAUUCCUUUGGG -58
Get sequence
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