MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-499

Family name MIR-499 (all species)
Seed UAAGACU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Dre-Mir-499-P1  Dre-Mir-499-P2  Ebu-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Gmo-Mir-499-P1  Hsa-Mir-499  Lch-Mir-499  Loc-Mir-499  Mal-Mir-499-P1  Mdo-Mir-499  Mml-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Tgu-Mir-499  Tni-Mir-499-P1  Xla-Mir-499-P3  Xla-Mir-499-P4  Xtr-Mir-499 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01080194.1: 1434-1492 [-]
Precursor
(pre-Mir +30nt flank)
GCUUUCUGAACAACAACGAGAUCAAGGUAGUUAAGACUUGCAGUGAUGUUUAGCUGAUUUAUGAAUGAACAUCACUUUAAGUCUGUGCUAUCUUUCUACUCACUAUCUGCUGAAGAGUA
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Structure
        10         20         30        40        50         
GCUUUCUGAACAACAAC-   AUC-|       UA       C           GCUGAU 
                  GAG    AAGGUAGU  AGACUUG AGUGAUGUUUA      \
                  CUC    UUCUAUCG  UCUGAAU UCACUACAAGU      U
AUGAGAAGUCGUCUAUCA   AUCU^       UG       U           AAGUAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-499_5p
mirBase accessionNone
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
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Star sequence

Sto-Mir-499_3p*
mirBase accessionNone
Sequence 
37- AACAUCACUUUAAGUCUGUGCU -59
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