MirGeneDB 2.1
MirGeneDB ID

Sto-Let-7-P1c

Family name LET-7 (all species)
Seed GAGGUAG
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Let-7-P1b  Sto-Let-7-P1d  Sto-Let-7-P2a1  Sto-Let-7-P2a2  Sto-Let-7-P2a3  Sto-Let-7-P2b2  Sto-Let-7-P2b3  Sto-Let-7-P2c1  Sto-Let-7-P2c2  Sto-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P1c  Ami-Let-7-P1c  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P1c  Cfa-Let-7-P1c  Cgi-Let-7  Cin-Let-7-P1  Cli-Let-7-P1c  Cpi-Let-7-P1c  Cpo-Let-7-P1c  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P1c  Dpu-Let-7  Dre-Let-7-P1c1  Dre-Let-7-P1c2  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P1c  Gga-Let-7-P1c  Gja-Let-7-P1c  Gmo-Let-7-P1c2  Hme-Let-7  Hsa-Let-7-P1c  Isc-Let-7  Lan-Let-7  Lch-Let-7-P1c  Lgi-Let-7  Loc-Let-7-P1c  Mal-Let-7-P1c2  Mml-Let-7-P1c  Mmu-Let-7-P1c  Mun-Let-7-P1c  Npo-Let-7  Oan-Let-7-P1c  Obi-Let-7  Ocu-Let-7-P1c  Ovu-Let-7  Pbv-Let-7-P1c  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P1c  Sha-Let-7-P1c  Sko-Let-7  Spt-Let-7-P1c  Spu-Let-7  Tca-Let-7  Tgu-Let-7-P1c  Xbo-Let-7  Xla-Let-7-P1c3  Xla-Let-7-P1c4  Xtr-Let-7-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_003427355_STO_add)		 BFAA01003685.1: 28902-28968 [-]
Precursor
(pre-Mir +30nt flank)
UCAGUCGGAAGCAUUUGCUUGCGUCCGGGUUGAGGUAGUAGGUUGUAUAGUUUAGAAUUACACCACGGGAGUUAACUAUACAAUCUCCUAGCUUUCCCCGGAGCAUGCACGAUCCAUCGAGAGACGC
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Structure
        10           20        30        40        50        60   
UCAGUCGGAAGCAUUUGCU---|  G      UU   G   U             UAGAAUUACA 
                      UGC UCCGGG  GAG UAG AGGUUGUAUAGUU          \
                      ACG AGGCCC  UUC AUC UCUAACAUAUCAA          C
CGCAGAGAGCUACCUAGCACGU^  -      CU   G   C             UUGAGGGCAC 
     120       110        100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Let-7-P1c_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUGUAUAGUU -22
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Star sequence

Sto-Let-7-P1c_3p* (predicted)
mirBase accessionNone
Sequence 
45- CUAUACAAUCUCCUAGCUUUCC -67
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