MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7383-P4b

Family name MIR-7383 (all species)
Seed AAGGUAC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7383-P4a  Sha-Mir-7383-P4c 
Orthologues
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL868515.1: 2332-2390 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUCUCACCUGAUCAUGAUUGGUGUAUUCCAAGGUACCUGAGGUCCUCUUAUUUUAUUUUGGCUGUAAGAGGCUCCAGCUCCCUUUGUCUACCCCAGUAUAAAACUCCAGCAUCACUA
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Structure
        10          20        30        40        50         
UCAUCUCACCUGAUCAUG--|    U   UUCC    UAC   AG U        UUUAU 
                    AUUGG GUA    AAGG   CUG  G CCUCUUAU     U
                    UGACC CAU    UUCC   GAC  C GGAGAAUG     U
AUCACUACGACCUCAAAAUA^    C   CUGU    CUC   CU -        UCGGU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7383-P4b_5p

mirBase accessionNone
Sequence
0- CAAGGUACCUGAGGUCCUCUUAU -23
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Co-mature sequence

Sha-Mir-7383-P4b_3p

mirBase accessionNone
Sequence
37- AAGAGGCUCCAGCUCCCUUUGU -59
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