Mir-7373-o2

MirGeneDB ID

Sha-Mir-7373-o2

Family name

MIR-7373 (all species)

Seed

CAGCUAC

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-7373-o1 Sha-Mir-7373-o3 Sha-Mir-7373-o4 Sha-Mir-7373-o5 Sha-Mir-7373-o6 Sha-Mir-7373-o7 Sha-Mir-7373-o8a Sha-Mir-7373-o8b Sha-Mir-7373-o8c Sha-Mir-7373-o8d1 Sha-Mir-7373-o8d2 Sha-Mir-7373-o8e Sha-Mir-7373-o8f Sha-Mir-7373-o8g Sha-Mir-7373-o8h Sha-Mir-7373-o8i Sha-Mir-7373-o8j Sha-Mir-7373-o9a Sha-Mir-7373-o9b Sha-Mir-7373-o9c

Orthologues

Mdo-Mir-7373-P2

Node of Origin (locus)

S. harrisii

Node of Origin (family)

Marsupialia

Genome context
(DEVIL_add)

GL867601.1: 2090784-2090838 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAAGGAAGACUCCCAAGGUGAUGGCAGGGCAAGCCCUUCUGUUAGUAGUUGAGUUAUCUUACUCAGCUACGAAUGAAGGGCGUGCUUCUUCAUCUCAACGUACAGCAUCCUUCAA

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Structure

        10          20        30        40        50       
AAAGGAAGACUCCCAAGGU--|    CA     A       UGUUA          UA 
                     GAUGG  GGGCA GCCCUUC     GUAGUUGAGU  U
                     CUACU  UUCGU CGGGAAG     CAUCGACUCA  C
AACUUCCUACGACAUGCAACU^    UC     G       UAAG-          UU 
   110       100        90        80         70        60

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Star sequence

Sha-Mir-7373-o2_5p*

mirBase accession

None

Sequence

0- AAGCCCUUCUGUUAGUAGUUGAGU -24

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Mature sequence

Sha-Mir-7373-o2_3p

mirBase accession

None

Sequence

32- UCAGCUACGAAUGAAGGGCGUGC -55

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