MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7371-o7

Family name MIR-7371 (all species)
Seed AAUGAGC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o2  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o4-v2  Sha-Mir-7371-o5  Sha-Mir-7371-o6  Sha-Mir-7371-o8  Sha-Mir-7371-o9  Sha-Mir-7371-o10  Sha-Mir-7371-o11  Sha-Mir-7371-o12  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o18  Sha-Mir-7371-o19  Sha-Mir-7371-o20  Sha-Mir-7371-o21  Sha-Mir-7371-o22  Sha-Mir-7371-o23  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-o28  Sha-Mir-7371-P13  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P7 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL867599.1: 265411-265466 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCAUACUGCCAUCCCUUCCCACUGCCUCAGCUGGAUAAGGUACUCUAUUGUACAUGCUGUCAAAAUGAGCACCUUAUCCAUAGAGGCUGUUGGCAAAGAACUUCUAAGCUAAAC
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Structure
        10          20        30        40         50       
UCUCAUACUGCCAUCCCUU--| C  U     AGC          A   UA-   UACA 
                     CC AC GCCUC   UGGAUAAGGU CUC   UUG    U
                     GG UG CGGAG   ACCUAUUCCA GAG   AAC    G
CAAAUCGAAUCUUCAAGAAAC^ U  U     AU-          C   UAA   UGUC 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7371-o7_5p*

mirBase accessionNone
Sequence
0- AGCUGGAUAAGGUACUCUAUUG -22
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Mature sequence

Sha-Mir-7371-o7_3p

mirBase accessionNone
Sequence
34- AAAUGAGCACCUUAUCCAUAGA -56
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