| MirGeneDB ID | Sha-Mir-430-o17 |
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| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
Sha-Mir-430-o10
Sha-Mir-430-o11
Sha-Mir-430-o12
Sha-Mir-430-o13
Sha-Mir-430-o14
Sha-Mir-430-o15
Sha-Mir-430-o16
Sha-Mir-430-o18
Sha-Mir-430-o19
Sha-Mir-430-o20
Sha-Mir-430-o21
Sha-Mir-430-o22
Sha-Mir-430-o23
Sha-Mir-430-o24
Sha-Mir-430-o25
Sha-Mir-430-o26
Sha-Mir-430-o27
Sha-Mir-430-o29
Sha-Mir-430-P1
Sha-Mir-430-P2
Sha-Mir-430-P3
Sha-Mir-430-P51
|
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| Orthologues |
Hsa-Mir-430-P17
|
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| Node of Origin (locus) |
S. harrisii
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(DEVIL_add) |
GL850554.1: 13105-13161 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CCGAGAAGCAGCAACAACCCAGUCUUGCACAUCCUAACUCUGAGUCCUUAUUGGAUAUUUGAAGAUAAGUGCUCUCAGUUGGGAUGAGCCAGGCUGAGGACCAACUAUCCAAAGCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCGAGAAGCAGCAACAA- -| U A CU UC GGAUA
CC CAGUCU GC CAUCCUAACU GAG CUUAUU \
GG GUCGGA CG GUAGGGUUGA CUC GAAUAG U
UUCGAAACCUAUCAACCA A^ C A CU GU AAGUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Star sequence |
Sha-Mir-430-o17_5p* |
| mirBase accession | None |
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| Sequence |
0- AUCCUAACUCUGAGUCCUUAUU -22
Get sequence
|
|---|
| Mature sequence |
Sha-Mir-430-o17_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UAAGUGCUCUCAGUUGGGAUGA -57
Get sequence
|
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