MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-325

Family name MIR-325 (all species)
Seed UGAUUAA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-325  Hsa-Mir-325  Mdo-Mir-325  Mml-Mir-325  Mmu-Mir-325  Ocu-Mir-325  Rno-Mir-325 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(DEVIL_add)
GL834551.1: 1012060-1012119 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUAUUUAUUAUUUAUUACAGUGCCUGGCACGUAGUAGGUGCUUAAUAAAUGCUUGUUGAUUGAUUGGUUGAUUAAGCACCUACUCAGUGCAAGGCACUGUGCUAGACGCUGGCUGCCGA
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Structure
        10          20        30        40        50        60
UUUAUUUAUUAUUUAUU--|        G    GU              AAAU  UUGUUG 
                   ACAGUGCCU GCAC  AGUAGGUGCUUAAU    GC      A
                   UGUCACGGA CGUG  UCAUCCACGAAUUA    UG      U
AGCCGUCGGUCGCAGAUCG^        A    AC              GU--  GUUAGU 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-325_5p*

mirBase accessionNone
Sequence
0- CGUAGUAGGUGCUUAAUAAAUGC -23
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Mature sequence

Sha-Mir-325_3p

mirBase accessionNone
Sequence
38- UUGAUUAAGCACCUACUCAGUG -60
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