MirGeneDB 2.1

MirGeneDB ID

Rno-Mir-95-P2

Family name MIR-95 (all species)
Seed UCAACAG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-421
Paralogues Rno-Mir-95-P4 
Orthologues Bta-Mir-95-P2  Cfa-Mir-95-P2  Dno-Mir-95-P2  Hsa-Mir-95-P2  Mml-Mir-95-P2  Mmu-Mir-95-P2  Ocu-Mir-95-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)
chrX: 74443503-74443558 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-95-P2)
Mir-95-P2 chrX: 74443503-74443558 [-] UCSC Ensembl
Mir-374-P2 chrX: 74443655-74443706 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGUACCUAAUCCGGUGCACACUGUAGGCCUCAUUAAAUGUUUGUUGAAUGAAAAAAUGAAUCAUCAACAGACAUUAAUUGGGCGCCUGCUCUGUGAUCUCCAUGAGCUCAGCUU
Get precursor sequence
Structure
        10         20        30         40        50        
ACAGUACCUAAUCCGGUG-    CU      -|   UUA            A   AAAA 
                   CACA  GUAGGC CUCA   AAUGUUUGUUGA UGA    \
                   GUGU  CGUCCG GGGU   UUACAGACAACU ACU    A
UUCGACUCGAGUACCUCUA    CU      C^   UAA            -   AAGU 
    110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
 +
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Star sequence

Rno-Mir-95-P2_5p*

mirBase accessionMIMAT0001320
Sequence
0- CUCAUUAAAUGUUUGUUGAAUGA -23
Get sequence
Proposed targets microrna.org: MIMAT0001320
TargetScanVert: rno-miR-421-5p
miRDB: MIMAT0001320
Mature sequence

Rno-Mir-95-P2_3p

mirBase accessionMIMAT0017175
Sequence
34- AUCAACAGACAUUAAUUGGGCG -56
Get sequence
Proposed targets TargetScanVert: rno-miR-421-3p
miRDB: MIMAT0017175