MirGeneDB 2.1

MirGeneDB ID

Rno-Mir-32

Family name MIR-32 (all species)
Seed AUUGCAC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-32
Paralogues
Orthologues Aca-Mir-32  Ami-Mir-32  Bta-Mir-32  Cfa-Mir-32  Cli-Mir-32  Cmi-Mir-32  Cpi-Mir-32  Cpo-Mir-32  Dno-Mir-32  Ete-Mir-32  Gga-Mir-32  Gja-Mir-32  Hsa-Mir-32  Lch-Mir-32  Mdo-Mir-32  Mml-Mir-32  Mmu-Mir-32  Mun-Mir-32  Oan-Mir-32  Ocu-Mir-32  Pbv-Mir-32  Sha-Mir-32  Spt-Mir-32  Sto-Mir-32  Tgu-Mir-32  Xla-Mir-32 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(rn6)
chr5: 73934258-73934319 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCUCCCAUCCCGCUUGCUCUGGUGGGGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGCCUCAAUGCAAUUUAGUGUGUGUGAUAUUCUCACAUGAGUGCAUGCACACAGUCUGGCU
Get precursor sequence
Structure
        10          20        30        40        50        60 
AGGCUCCCAUCCCGCUU--|   UG          UG     U           UGUUGUCA 
                   GCUC  GUGGGGAUAU  CACAU ACUAAGUUGCA        \
                   UGAG  CACUCUUAUA  GUGUG UGAUUUAACGU        C
UCGGUCUGACACACGUACG^   UA          GU     -           AACUCCGG 
120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-32_5p

mirBase accessionMIMAT0000811
Sequence
0- UAUUGCACAUUACUAAGUUGCA -22
Get sequence
Proposed targets microrna.org: MIMAT0000811
TargetScanVert: rno-miR-32-5p
miRDB: MIMAT0000811
Star sequence

Rno-Mir-32_3p*

mirBase accessionMIMAT0017103
Sequence
41- CAAUUUAGUGUGUGUGAUAUU -62
Get sequence
Proposed targets TargetScanVert: rno-miR-32-3p
miRDB: MIMAT0017103