MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-211
Paralogues Rno-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1b  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1b  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr1: 125042144-125042201 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUUCAGCUUGGACCUGUGACCUCUGGGCUUCCCUUUGUCAUCCUUUGCCUAGGCCUCUGAGUGGGGCAAGGACAGCAAAGGGGGGCUCAGUGGUCACCUCUACUGCAGAGAGUUUU
Get precursor sequence
Structure
        10          20        30        40        50         
CAGUUCAGCUUGGACCU--|     U                CA     U    AGGCCU 
                   GUGACC CUGGGCUUCCCUUUGU  UCCUU GCCU      \
                   CACUGG GACUCGGGGGGAAACG  AGGAA CGGG      C
UUUUGAGAGACGUCAUCUC^     U                AC     -    GUGAGU 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-204-P1_5p
mirBase accessionMIMAT0000882
Sequence 
0- UUCCCUUUGUCAUCCUUUGCCU -22
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Proposed targets microrna.org: MIMAT0000882
TargetScanVert: rno-miR-211-5p
miRDB: MIMAT0000882
Star sequence

Rno-Mir-204-P1_3p*
mirBase accessionMIMAT0017157
Sequence 
37- GCAAGGACAGCAAAGGGGGGC -58
Get sequence
Proposed targets TargetScanVert: rno-miR-211-3p
miRDB: MIMAT0017157