MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-671

Family name MIR-671 (all species)
Seed CCGGUUC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-671
Paralogues
Orthologues Bta-Mir-671  Cfa-Mir-671  Cpo-Mir-671  Dno-Mir-671  Ete-Mir-671  Hsa-Mir-671  Mml-Mir-671  Mmu-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(oryCun2_add)
chr13: 12646802-12646861 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCCAGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUCCGGGCCGUAGAGCCAGGGCUGGUGC
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Structure
        10          20        30        40        50        60 
UGGCCAGUGAACUGGCA--|   A        A   A      GA           UGAUGG 
                   GGCC GGAAGAGG GGA GCCCUG  GGGGCUGGAGG      \
                   CCGG CCUUCUCC CCU CGGGAC  UCUUGGCCUCC      A
CGUGGUCGGGACCGAGAUG^   G        A   -      --           UUUUGU 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Star sequence

Ocu-Mir-671_5p*

mirBase accessionMIMAT0048555
Sequence
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
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Mature sequence

Ocu-Mir-671_3p

mirBase accessionMIMAT0048556
Sequence
39- UCCGGUUCUCAGGGCUCCACC -60
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