MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-383
Paralogues Ocu-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(oryCun2_add)
chrUn0011: 835693-835754 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)
Mir-383-v2 chrUn0011: 835692-835754 [+] UCSC Ensembl
Mir-383-v1 chrUn0011: 835693-835754 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUUCAGACUUCCCACGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUAGCAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAU
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Structure
        10         20         30        40        50        60 
ACUUCAGACUUCCCACGU-   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UACUCCAUUUUCCGAUCCU   A     AA^ A      CG    -        CUAACGAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-383-v1_5p

mirBase accessionMIMAT0048429
Sequence
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Ocu-Mir-383-v1_3p*

mirBase accessionMIMAT0048430
Sequence
41- CCACAGCACUGCCUGGUCAGA -62
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