MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-217-v2

Family name MIR-217 (all species)
Seed UACUGCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-217
Paralogues Ocu-Mir-217-v1 
Orthologues Aca-Mir-217-v2  Ami-Mir-217-v2  Bfl-Mir-217  Bla-Mir-217  Bta-Mir-217-v2  Cfa-Mir-217-v2  Cli-Mir-217-v2  Cmi-Mir-217  Cpi-Mir-217-v2  Cpo-Mir-217-v2  Dno-Mir-217-v2  Dre-Mir-217-v2  Ete-Mir-217-v2  Gga-Mir-217-v2  Gja-Mir-217-v2  Gmo-Mir-217  Hsa-Mir-217-v2  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mml-Mir-217-v2  Mmu-Mir-217-v2  Mun-Mir-217-v2  Oan-Mir-217-v2  Pbv-Mir-217-v2  Rno-Mir-217-v2  Sha-Mir-217-v2  Spt-Mir-217  Sto-Mir-217-v2  Tgu-Mir-217-v2  Tni-Mir-217  Xtr-Mir-217-v2 
Node of Origin (locus) Chordata
Node of Origin (family) Chordata
Genome context
(oryCun2_add)		 chr2: 130108838-130108898 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-217-v2)		 Mir-216-P2a chr2: 130089612-130089673 [+] UCSC Ensembl
Mir-216-P2b chr2: 130101540-130101601 [+] UCSC Ensembl
Mir-217-v2 chr2: 130108838-130108898 [+] UCSC Ensembl
Mir-217-v1 chr2: 130108839-130108897 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCUAAUUAUUACAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCUGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAAGCACCAGUAAACCCC
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Structure
        10        20          30        40        50        60
ACCUAAUUAUUACAGUUUUU--|    CGC  A  C     C          U  AUAAGA 
                      GAUGU   AG UA UGCAU AGGAACUGAU GG      A
                      CUACG   UC GU ACGUA UCCUUGACUA CC      U
CCCCAAAUGACCACGAACAAAU^    ACU  C  U     A          -  ACUGUC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-217-v2_5p
mirBase accessionMIMAT0048345
Sequence 
0- AUACUGCAUCAGGAACUGAUUGG -23
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Star sequence

Ocu-Mir-217-v2_3p*
mirBase accessionMIMAT0048346
Sequence 
39- AUCAGUUCCUAAUGCAUUGCCU -61
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