MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-181-P1b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-181a-2
Paralogues Ocu-Mir-181-P1a  Ocu-Mir-181-P1c  Ocu-Mir-181-P2a  Ocu-Mir-181-P2b  Ocu-Mir-181-P2c 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Bta-Mir-181-P1b  Cfa-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gja-Mir-181-P1b  Gmo-Mir-181-P1b2  Hsa-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mml-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Oan-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Sto-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chrUn0001: 2614666-2614725 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1b)		 Mir-181-P2b chrUn0001: 2613453-2613512 [-] UCSC Ensembl
Mir-181-P1b chrUn0001: 2614666-2614725 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCCAGGCCGGCUGUUAGAGGACUCCAAUGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACCGACCGUUGACUGUACCUUAGGGUCCUUACAGACAACACUACUUUAC
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Structure
        10          20        30        40        50        60 
UCCCAGGCCGGCUGUUA--|       CAAUGA   U      CU       A  UUGGGAU 
                   GAGGACUC      ACA UCAACG  GUCGGUG GU       \
                   UUCCUGGG      UGU AGUUGC  CAGCCAC CA       U
CAUUUCAUCACAACAGACA^       AUUCCA   C      --       -  AAAAAGU 
.       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-181-P1b_5p
mirBase accessionMIMAT0048275
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Ocu-Mir-181-P1b_3p*
mirBase accessionMIMAT0048277
Sequence 
38- ACCACCGACCGUUGACUGUACC -60
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