MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-148-P1

Family name MIR-148 (all species)
Seed CAGUGCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-148a
Paralogues Ocu-Mir-148-P3  Ocu-Mir-148-P4 
Orthologues Aca-Mir-148-P1  Bta-Mir-148-P1  Cfa-Mir-148-P1  Cli-Mir-148-P1  Cli-Mir-148-P1-as  Cmi-Mir-148-P1  Cpi-Mir-148-P1  Cpo-Mir-148-P1  Dno-Mir-148-P1  Ebu-Mir-148  Ete-Mir-148-P1  Gga-Mir-148-P1  Gja-Mir-148-P1  Hsa-Mir-148-P1  Lch-Mir-148-P1  Loc-Mir-148-P1  Mdo-Mir-148-P1  Mml-Mir-148-P1  Mmu-Mir-148-P1  Mun-Mir-148-P1  Oan-Mir-148-P1  Pbv-Mir-148-P1  Pma-Mir-148-o1  Rno-Mir-148-P1  Spt-Mir-148-P1  Sto-Mir-148-P1  Tgu-Mir-148-P1  Tgu-Mir-148-P1-as  Xla-Mir-148-P1a  Xla-Mir-148-P1b  Xtr-Mir-148-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr10: 10783749-10783808 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAAGACAGCCCGCUCGGCCUUUGGAGCCAAAGUUCUGAGACACUCCGACUCUGAGUACGAUAGAAGUCAGUGCACUACAGAACUUUGUCUCCGGAGGCCGCCGACGCCGGGCCGGUGG
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Structure
        10          20        30         40         50         
AGGAAGACAGCCCGCUC--           C          -  A-|   CC    CUGAGU 
                   GGCCUUUGGAG CAAAGUUCUG AG  CACU  GACU      A
                   CCGGAGGCCUC GUUUCAAGAC UC  GUGA  CUGA      C
GGUGGCCGGGCCGCAGCCG           U          A  AC^   --    AGAUAG 
.       110       100        90        80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-148-P1_5p*
mirBase accessionMIMAT0048259
Sequence 
0- AAAGUUCUGAGACACUCCGACU -22
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Mature sequence

Ocu-Mir-148-P1_3p
mirBase accessionMIMAT0048260
Sequence 
38- UCAGUGCACUACAGAACUUUGU -60
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