MirGeneDB 2.1

MirGeneDB ID

Oan-Novel-12

Family name OAN-NOVEL-12 (all species)
Seed GGGAACA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041743.1: 40940749-40940804 [+]
Clustered miRNAs
(< 50kb from Novel-12)
Mir-30-P1d NC_041743.1: 40945688-40945750 [+]
Mir-30-P2d NC_041743.1: 40947632-40947692 [+]
Precursor
(pre-Mir +30nt flank)
AGGGUACAAUACAAUAAGCUCCUUAUGGGCAGGGAACAUGUCUGCUAAUUGUUCGAUACAGCACAAUUAGCGGAGAUGUUCCCUGCCUAUAAUGAGUUUAUGGUCUAGUGGGGGAG
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Structure
        10          20        30        40        50       
AGGGUACAAUACAAUAA--|   C                 G            UCGA 
                   GCUC UUAUGGGCAGGGAACAU UCUGCUAAUUGU    U
                   UGAG AAUAUCCGUCCCUUGUA AGGCGAUUAACA    A
GAGGGGGUGAUCUGGUAUU^   U                 G            CGAC 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Novel-12_5p

mirBase accessionNone
Sequence
0- AGGGAACAUGUCUGCUAAUUGU -22
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Star sequence

Oan-Novel-12_3p*

mirBase accessionNone
Sequence
34- AAUUAGCGGAGAUGUUCCCUGC -56
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