MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-26-P2

Family name MIR-26 (all species)
Seed UCAAGUA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues Oan-Mir-26-P1  Oan-Mir-26-P4 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Dre-Mir-26-P2a  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Gmo-Mir-26-P2a  Gmo-Mir-26-P2b  Hsa-Mir-26-P2  Lch-Mir-26-P2  Loc-Mir-26-P2  Mal-Mir-26-P2a  Mal-Mir-26-P2b  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Ocu-Mir-26-P2  Pbv-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Sto-Mir-26-P2  Tgu-Mir-26-P2  Tni-Mir-26-P2b  Xla-Mir-26-P2e  Xla-Mir-26-P2f  Xtr-Mir-26-P2c  Xtr-Mir-26-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041728.1: 180525575-180525632 [+]
Precursor
(pre-Mir +30nt flank)
CUCCGUCCGCGGCCCGUGGCCGGGCCCUGUUUCAAGUAAUCCAGGAUAGGCUGUCCUGCCGUUCGGCCUGUUCUCCAUUACUUGGCUCAGGUCCCGGCGCUCAGCGUCUCCCGCCUGG
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Structure
        10          20        30        40        50        
CUCCGUCCGCGGCCCGUG--|     C    UU         CC          GUCCU 
                    GCCGGG CCUG  UCAAGUAAU  AGGAUAGGCU     G
                    CGGCCC GGAC  GGUUCAUUA  UCUUGUCCGG     C
GGUCCGCCCUCUGCGACUCG^     U    UC         CC          CUUGC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-26-P2_5p

mirBase accessionNone
Sequence
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Oan-Mir-26-P2_3p*

mirBase accessionNone
Sequence
36- CCUGUUCUCCAUUACUUGGCUC -58
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