| MirGeneDB ID | Oan-Mir-203-v2 |
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| Family name |
MIR-203 (all species) |
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| Seed |
GAAAUGU |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
|
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| Paralogues |
Oan-Mir-203-v1
|
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| Orthologues |
Aca-Mir-203-v2
Ami-Mir-203-v2
Bta-Mir-203-v2
Cfa-Mir-203-v2
Cpi-Mir-203-v2
Cpo-Mir-203-v2
Dno-Mir-203-v2
Ete-Mir-203-v2
Gga-Mir-203-v2
Gja-Mir-203-v2
Hsa-Mir-203-v2
Lch-Mir-203
Loc-Mir-203-v2
Mdo-Mir-203-v2
Mml-Mir-203-v2
Mmu-Mir-203-v2
Mun-Mir-203-v2
Ocu-Mir-203-v2
Pbv-Mir-203-v2
Rno-Mir-203-v2
Sha-Mir-203-v2
Spt-Mir-203
Sto-Mir-203-v2
Tgu-Mir-203-v2
Xtr-Mir-203-v2
|
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| Node of Origin (locus) |
Vertebrata
|
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| Node of Origin (family) |
Vertebrata
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041728.1: 64035377-64035437 [+]
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Precursor
(pre-Mir +30nt flank) |
CGGGGACCCACGCGGCAGUCUCCCUGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUCUGGCCUAAUUGUGAAAUGUUUAGGACCACUUGACCCGGGCAGGCCUCGGCAGCGGCGAAGGCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CGGGGACCCACGCGGCA-- -| U GC U G A GUUCUCU
GUCU CCC GGU AGUGGUUCU AACA UUCA CA \
CGGA GGG CCA UCACCAGGA UUGU AAGU GU G
GCGGAAGCGGCGACGGCUC C^ C GU U A - UAAUCCG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Unlike most other vertebrates this appears to be a separate DICER cut in addition to a 3' monouridylation. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Oan-Mir-203-v2_5p* |
| mirBase accession | None |
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| Sequence |
0- AGUGGUUCUUAACAGUUCAACA -22
Get sequence
|
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| Mature sequence |
Oan-Mir-203-v2_3p |
| mirBase accession | None |
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| Sequence |
39- UGAAAUGUUUAGGACCACUUGA -61
Get sequence
|
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