MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-192-P1

Family name MIR-192 (all species)
Seed UGACCUA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-215
Paralogues Oan-Mir-192-P1-as  Oan-Mir-192-P2 
Orthologues Aca-Mir-192-P1  Ami-Mir-192-P1  Bta-Mir-192-P1  Cfa-Mir-192-P1  Cli-Mir-192-P1  Cmi-Mir-192-P1  Cpi-Mir-192-P1  Cpo-Mir-192-P1  Dno-Mir-192-P1  Ebu-Mir-192-o1  Ete-Mir-192-P1  Gga-Mir-192-P1  Gja-Mir-192-P1  Hsa-Mir-192-P1  Lch-Mir-192-P1  Mdo-Mir-192-P1  Mml-Mir-192-P1  Mmu-Mir-192-P1  Mun-Mir-192-P1  Ocu-Mir-192-P1  Pbv-Mir-192-P1  Pma-Mir-192-o1  Rno-Mir-192-P1  Spt-Mir-192-P1  Sto-Mir-192-P1  Tgu-Mir-192-P1  Xla-Mir-192-P1a  Xla-Mir-192-P1b  Xtr-Mir-192-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041746.1: 8010939-8010997 [+]
Clustered miRNAs
(< 50kb from Mir-192-P1)
Mir-194-P1 NC_041746.1: 8009904-8009959 [+]
Mir-192-P1 NC_041746.1: 8010939-8010997 [+]
Precursor
(pre-Mir +30nt flank)
GCAAUCCAGGAAGAAAUGGUGUACAGGAAAAUGACCUAUGAAUUGACAGACAGUAUAUUUAGAUUGUCUGUCAUUUCUGUAGGCCAAAGUUCUGCAUGCCUUCACUGCUCCAGCGCCAG
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Structure
        10          20        30         40        50        
GCAAUCCAGGAAGAAAU--     A     AAA  A     -|  U         GUAUA 
                   GGUGU CAGGA   UG CCUAU GAA UGACAGACA     U
                   CCGUA GUCUU   AC GGAUG CUU ACUGUCUGU     U
GACCGCGACCUCGUCACUU     C     GAA  C     U^  U         UAGAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-192-P1_5p

mirBase accessionMIMAT0007000
Sequence
0- AUGACCUAUGAAUUGACAGACA -22
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Star sequence

Oan-Mir-192-P1_3p*

mirBase accessionMIMAT0007001
Sequence
36- UCUGUCAUUUCUGUAGGCCAAAG -59
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