MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-1409

Family name MIR-1409 (all species)
Seed AGCGCAC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-1409
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041732.1: 8917730-8917789 [+]
Precursor
(pre-Mir +30nt flank)
AUCACUCCACGAGAGCCGGCUUUGGGAGGCAAGGGAACUUCUUCUCGCUGAAUAAGGAAAUGCCGUUUCAGCGCACUCAAGUUCUCAUGCCUCCCUCUGCUCCAGCUCAGGCAGCGAAAG
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Structure
        10          20        30        40        50         
AUCACUCCACGAGAGCC--|  UUU        A        CUUCU       UAAGGA 
                   GGC   GGGAGGCA GGGAACUU     CGCUGAA      A
                   UCG   CCCUCCGU CUCUUGAA     GCGACUU      A
GAAAGCGACGGACUCGACC^  UCU        A        CUCAC       UGCCGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-1409_5p*

mirBase accessionMIMAT0007226
Sequence
0- AAGGGAACUUCUUCUCGCUGAA -22
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Mature sequence

Oan-Mir-1409_3p

mirBase accessionMIMAT0007227
Sequence
38- CAGCGCACUCAAGUUCUCAUGC -60
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