| MirGeneDB ID | Oan-Mir-1375 |
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| Family name |
MIR-1375 (all species) |
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| Seed |
GCUUCCU |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1375
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. anatinus
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| Node of Origin (family) |
O. anatinus
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041746.1: 989567-989622 [+]
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Precursor
(pre-Mir +30nt flank) |
AGGAUGGCCAUUCUGCUGCUGCAGCUGCUCUGCUUCCUGUUGGGCUUCCUGCGGGGAGAGUUCCAGGGAGCGCAGCAAGAAGAGAAUCAGCUCCUGCUGCCGUCACCGCCGCCGUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGGAUGGCCAUUCUGCU-- UGC C-| G C G CGGGG
GC AGCUG UCU CUUC UGUUG GCUUCCUG A
CG UCGAC AGA GAAG ACGAC CGAGGGAC G
CUGCCGCCGCCACUGCCGU UCC UA^ - A G CUUGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Oan-Mir-1375_5p |
| mirBase accession | MIMAT0007064 |
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| Sequence |
0- UGCUUCCUGUUGGGCUUCCUGC -22
Get sequence
|
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| Star sequence |
Oan-Mir-1375_3p* |
| mirBase accession | MIMAT0007065 |
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| Sequence |
34- AGGGAGCGCAGCAAGAAGAGAA -56
Get sequence
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