MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-452-v2

Family name MIR-452 (all species)
Seed GUUUGCA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-452
Paralogues Mmu-Mir-452-v1 
Orthologues Bta-Mir-452-v2  Cfa-Mir-452-v2  Cpo-Mir-452-v2  Ete-Mir-452-v2  Hsa-Mir-452-v2  Mml-Mir-452-v2  Ocu-Mir-452-v2  Rno-Mir-452-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chrX: 72262236-72262292 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-452-v2)
Mir-224 chrX: 72261036-72261105 [-] UCSC Ensembl
Mir-452-v1 chrX: 72262235-72262295 [-] UCSC Ensembl
Mir-452-v2 chrX: 72262236-72262292 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCUCUUAUAUAUGCUAAGCAGUUACAACUGUUUGCAGAGGAAACUGAGACUUUAUAACUAUGUCUCAGUCUCAUCUGCAAAGAGGUAAGUGCUUUGCCAAGCCCCUUGAAGAAUG
Get precursor sequence
Structure
        10            20        30        40        50        
CCUCUCUUAUAUAUGCU----|    G    AA  G        G  A        UUUAU 
                     AAGCA UUAC  CU UUUGCAGA GA ACUGAGAC     \
                     UUCGU AAUG  GA AAACGUCU CU UGACUCUG     A
GUAAGAAGUUCCCCGAACCGU^    G    --  G        A  C        UAUCA 
     110       100        90          80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-452-v2_5p

mirBase accessionMIMAT0001637
Sequence
0- UGUUUGCAGAGGAAACUGAGAC -22
Get sequence
Proposed targets microrna.org: MIMAT0001637
miRDB: MIMAT0001637
Star sequence

Mmu-Mir-452-v2_3p*

mirBase accessionMIMAT0017194
Sequence
35- CUCAGUCUCAUCUGCAAAGAGG -57
Get sequence
Proposed targets TargetScanVert: mmu-miR-452-3p
miRDB: MIMAT0017194