MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-345

Family name MIR-345 (all species)
Seed CUGAACU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-345
Paralogues
Orthologues Bta-Mir-345  Cfa-Mir-345  Cpo-Mir-345  Dno-Mir-345  Ete-Mir-345  Hsa-Mir-345  Mml-Mir-345  Rno-Mir-345 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr12: 108836988-108837047 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCGUGAAGCCGACACCCAAGUCCAGGCCUGCUGACCCCUAGUCCAGUGCUUGUGGUGGCUACUGGGCCCUGAACUAGGGGUCUGGAGACCUGGGUUUGAUCUCCACAGGCUUUGAGUC
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Structure
        10          20        30         40        50         
CUUCGUGAAGCCGACACC--|  GU     C  G  -          C   U   UGUGGU 
                    CAA  CCAGG CU CU GACCCCUAGU CAG GCU      G
                    GUU  GGUCC GA GG CUGGGGAUCA GUC CGG      G
CUGAGUUUCGGACACCUCUA^  UG     A  -  U          A   C   GUCAUC 
.       110       100        90         80        70        60
Deep sequencing
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CommentThe murid rodents have shifted both the Drosha and Dicer cut -1 relative to the other mammals.
3' NTU Yes
MotifsUGUG in loop
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-345_5p*

mirBase accessionMIMAT0000595
Sequence
0- UGCUGACCCCUAGUCCAGUGCU -22
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Proposed targets microrna.org: MIMAT0000595
miRDB: MIMAT0000595
Mature sequence

Mmu-Mir-345_3p

mirBase accessionMIMAT0004656
Sequence
39- CCUGAACUAGGGGUCUGGAGA -60
Get sequence
Proposed targets microrna.org: MIMAT0004656
miRDB: MIMAT0004656