MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-331

Family name MIR-331 (all species)
Seed CCCCUGG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-331
Paralogues
Orthologues Bta-Mir-331  Cfa-Mir-331  Cpo-Mir-331  Dno-Mir-331  Ete-Mir-331  Hsa-Mir-331  Mml-Mir-331  Ocu-Mir-331  Rno-Mir-331 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr10: 93963783-93963838 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAAGGAGUCUGGUUUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUCAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACCCGUGCAUCAUUCCUGGAA
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Structure
        10          20        30        40        50        
CCAAGGAGUCUGGUUUU--|        U        U    U       AU CCAGAU 
                   GUUUGGGUU GUUCUAGG AUGG CCCAGGG  C      \
                   CAAAUCCAA CAAGAUCC UAUC GGGUCCC  G      C
AAGGUCCUUACUACGUGCC^        C        -    C       CG ACCAAA 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-331_5p*

mirBase accessionMIMAT0004643
Sequence
0- CUAGGUAUGGUCCCAGGGAUCC -22
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Proposed targets microrna.org: MIMAT0004643
TargetScanVert: mmu-miR-331-5p
miRDB: MIMAT0004643
Mature sequence

Mmu-Mir-331_3p

mirBase accessionMIMAT0000571
Sequence
35- GCCCCUGGGCCUAUCCUAGAA -56
Get sequence
Proposed targets microrna.org: MIMAT0000571
TargetScanVert: mmu-miR-331-3p
miRDB: MIMAT0000571