MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-1934

Family name MIR-1934 (all species)
Seed GGAUGAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-1934
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)
chr11: 69663055-69663113 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAAGAGCCAUUCCGAGCUGGGCCUUCUUUCUGGUCCCCUGCUUCGUCCUCUGUCCAGAUGUUAAGAGGAUGACGGUGGGGCUGGUGAGAUGGCUCAGCGGUUAAGAGCGCCGAUUGC
Get precursor sequence
Structure
        10          20        30         40        50         
CAAAAGAGCCAUUCCGA--        U    U UG     -|  CU         GUCCA 
                   GCUGGGCC UCUU C  GUCCC CUG  UCGUCCUCU     G
                   CGACUCGG AGAG G  CGGGG GGC  AGUAGGAGA     A
CGUUAGCCGCGAGAAUUGG        U    U GU     U^  --         AUUGU 
       110       100        90        80          70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-1934_5p*

mirBase accessionMIMAT0009398
Sequence
0- UCUGGUCCCCUGCUUCGUCCUCU -23
Get sequence
Proposed targets microrna.org: MIMAT0009398
TargetScanVert: mmu-miR-1934-5p
miRDB: MIMAT0009398
Mature sequence

Mmu-Mir-1934_3p

mirBase accessionMIMAT0017341
Sequence
37- AGGAUGACGGUGGGGCUGGUGA -59
Get sequence
Proposed targets TargetScanVert: mmu-miR-1934-3p
miRDB: MIMAT0017341