MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-506-P4f

Family name MIR-506 (all species)
Seed GAUUGGU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID
Paralogues Mml-Mir-506-P1  Mml-Mir-506-P2  Mml-Mir-506-P3  Mml-Mir-506-P4d  Mml-Mir-506-P4e  Mml-Mir-506-P5  Mml-Mir-506-P6a  Mml-Mir-506-P6b1  Mml-Mir-506-P6b2  Mml-Mir-506-P6c1  Mml-Mir-506-P6c2  Mml-Mir-506-P7a  Mml-Mir-506-P8  Mml-Mir-506-P9  Mml-Mir-506-P10  Mml-Mir-506-P11  Mml-Mir-506-P12  Mml-Mir-506-P13  Mml-Mir-506-P29 
Orthologues Cpo-Mir-506-o4 
Node of Origin (locus) M. mulatta
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 140965542-140965599 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P4f)
Mir-506-P6c1 chrX: 140924370-140924427 [-] UCSC Ensembl
Mir-506-P6a chrX: 140933343-140933400 [-] UCSC Ensembl
Mir-506-P1 chrX: 140946831-140946887 [-] UCSC Ensembl
Mir-506-P2 chrX: 140947157-140947214 [-] UCSC Ensembl
Mir-506-P3 chrX: 140953023-140953080 [-] UCSC Ensembl
Mir-506-P8 chrX: 140957066-140957123 [-] UCSC Ensembl
Mir-506-P4e chrX: 140966427-140966484 [-] UCSC Ensembl
Mir-506-P5 chrX: 140974554-140974611 [-] UCSC Ensembl
Mir-506-P7a chrX: 140981185-140981242 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAUCCUCAGACAUGUUGUGUGUGGUACCCUACUGCAGGCAGUGGCAAUCAUGUGUAGUUAAAAAUGAUUGGUAUGUCUGUGGGUAGAGUAAUGCAUGACACAUGCAACAUACAUGAU
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Structure
        10          20        30         40        50        
CCAUCCUCAGACAUGUU-  -    GG   C   -|UG      G  G       GUGUA 
                  GU GUGU  UAC CUA C  CAGGCA UG CAAUCAU     G
                  CA UACG  AUG GAU G  GUCUGU AU GUUAGUA     U
UAGUACAUACAACGUACA  G    UA   A   G^GU      -  G       AAAAU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-506-P4f_5p* (predicted)

mirBase accessionNone
Sequence
0- UACUGCAGGCAGUGGCAAUCAUG -23
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Mature sequence

Mml-Mir-506-P4f_3p

mirBase accessionNone
Sequence
35- UGAUUGGUAUGUCUGUGGGUAGA -58
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