Mir-506-P13

MirGeneDB ID

Mml-Mir-506-P13

Family name

MIR-506 (all species)

Seed

ACUGUUU

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-892c

Paralogues

Mml-Mir-506-P1 Mml-Mir-506-P2 Mml-Mir-506-P3 Mml-Mir-506-P4d Mml-Mir-506-P4e Mml-Mir-506-P4f Mml-Mir-506-P5 Mml-Mir-506-P6a Mml-Mir-506-P6b1 Mml-Mir-506-P6b2 Mml-Mir-506-P6c1 Mml-Mir-506-P6c2 Mml-Mir-506-P7a Mml-Mir-506-P8 Mml-Mir-506-P9 Mml-Mir-506-P10 Mml-Mir-506-P11 Mml-Mir-506-P12 Mml-Mir-506-P29

Orthologues

Hsa-Mir-506-P13

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Eutheria

Genome context
(rheMac8_trace)

chrX: 139700246-139700302 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-506-P13)

Mir-506-P13 chrX: 139700246-139700302 [-] UCSC Ensembl
Mir-506-P10 chrX: 139701739-139701795 [-] UCSC Ensembl
Mir-506-P9 chrX: 139702265-139702321 [-] UCSC Ensembl
Mir-506-P11 chrX: 139703819-139703875 [-] UCSC Ensembl
Mir-506-P12 chrX: 139704349-139704405 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCACAAUCAGUCGUGCUGUGGGCAGUGCUCUAUUCAGAAAGGUGCCAGUCACUUAGAUUACAUGUCACUGUUUCCUUUCUGAGUGGAGUAAGGCUUACCAAGUACAAGUGUGUGGUG

Get precursor sequence

Structure

        10          20        30        40        50        
CCACAAUCAGUCGUGCU--|     AG                 UGC    C  UUAGA 
                   GUGGGC  UGCUCUAUUCAGAAAGG   CAGU AC     \
                   CAUUCG  AUGAGGUGAGUCUUUCC   GUCA UG     U
GUGGUGUGUGAACAUGAAC^     GA                 UUU    C  UACAU 
     110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-506-P13_5p*

mirBase accession

MIMAT0028384

Sequence

0- UAUUCAGAAAGGUGCCAGUCAC -22

Get sequence

Proposed targets

TargetScanVert: mml-miR-892c-5p

Mature sequence

Mml-Mir-506-P13_3p

mirBase accession

MIMAT0028385

Sequence

35- CACUGUUUCCUUUCUGAGUGGA -57

Get sequence

Proposed targets

TargetScanVert: mml-miR-892c-3p