MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-493

Family name MIR-493 (all species)
Seed UGUACAU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-493
Paralogues
Orthologues Bta-Mir-493  Cfa-Mir-493  Cpo-Mir-493  Dno-Mir-493  Ete-Mir-493  Hsa-Mir-493  Mmu-Mir-493  Ocu-Mir-493  Rno-Mir-493 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chr7: 163202852-163202913 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-493)
Mir-770 chr7: 163185011-163185072 [+] UCSC Ensembl
Mir-493 chr7: 163202852-163202913 [+] UCSC Ensembl
Mir-337-v1 chr7: 163207997-163208056 [+] UCSC Ensembl
Mir-337-v2 chr7: 163207997-163208056 [+] UCSC Ensembl
Mir-431 chr7: 163215224-163215287 [+] UCSC Ensembl
Mir-433 chr7: 163216095-163216168 [+] UCSC Ensembl
Mir-127 chr7: 163217199-163217254 [+] UCSC Ensembl
Mir-432 chr7: 163218697-163218765 [+] UCSC Ensembl
Mir-136-v2 chr7: 163218917-163218972 [+] UCSC Ensembl
Mir-136-v1 chr7: 163218917-163218972 [+] UCSC Ensembl
Mir-370 chr7: 163245322-163245378 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUCGGGGCUCAUUCUGGCCUCCAGGGCUUUGUACAUGGUAGGCUUUCAUUCAUUCGUUUGCACAUUCGGUGAAGGUCUACUGUGUGCCAGGCCCUGUGCCAGGCAUCGUGUAGAUGGACG
Get precursor sequence
Structure
        10           20        30        40        50        60 
GCUUCGGGGCUCAUUCU---|  CUC        U                    CAUUCGUU 
                    GGC   CAGGGCUU GUACAUGGUAGGCUUUCAUU        \
                    CCG   GUCCCGGA CGUGUGUCAUCUGGAAGUGG        U
GCAGGUAGAUGUGCUACGGA^  U--        C                    CUUACACG 
120       110       100          90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-493_5p

mirBase accessionMIMAT0026884
Sequence
0- UUGUACAUGGUAGGCUUUCAUU -22
Get sequence
Proposed targets TargetScanVert: mml-miR-493-5p
Co-mature sequence

Mml-Mir-493_3p

mirBase accessionMIMAT0006355
Sequence
41- UGAAGGUCUACUGUGUGCCAG -62
Get sequence
Proposed targets TargetScanVert: mml-miR-493-3p