MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-328

Family name MIR-328 (all species)
Seed UGGCCCU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID
Paralogues
Orthologues Bta-Mir-328  Cfa-Mir-328  Cpo-Mir-328  Dno-Mir-328  Ete-Mir-328  Hsa-Mir-328  Mmu-Mir-328  Ocu-Mir-328  Rno-Mir-328 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chr20: 51478394-51478454 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUCCUGGGCUGUCUCAGAGCCUGGAGCGGGGGGGCAGGAGGGGCUCAGGGAGAAAGUGCAUGCAGCCCCUGGCCCUCUCUGCCCUUCCGUCCCCUGCUCUUAGCCAUGCUGUGCCCAGU
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Structure
        10          20        30        40        50        60
AAGUCCUGGGCUGUCUC--|    CU  AG           GA     U     AGAAAGU 
                   AGAGC  GG  CGGGGGGGCAG  GGGGC CAGGG       G
                   UCUCG  CC  GCCUUCCCGUC  UCCCG GUCCC       C
UGACCCGUGUCGUACCGAU^    UC  CU           UC     -     CGACGUA 
 .       110       100        90        80         70
Deep sequencing
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CommentAlthough there is a templated T at the 3' end of the 3p arm, the post-transcriptional addition of a terminal 3' U is supported by the 3' offset reads in cow in addition to the 3p reads in armadillo where the T is not templated.
3' NTU Yes
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-328_5p* (predicted)

mirBase accessionNone
Sequence
0- GGGGGGCAGGAGGGGCUCAGGG -22
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Mature sequence

Mml-Mir-328_3p

mirBase accessionNone
Sequence
40- CUGGCCCUCUCUGCCCUUCCG -61
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