| MirGeneDB ID | Mml-Mir-28-P2 |
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| Family name |
MIR-28 (all species) |
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| Seed |
CGAGGAG |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-151
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| Paralogues |
Mml-Mir-28-P1
Mml-Mir-28-P3
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| Orthologues |
Bta-Mir-28-P2
Cfa-Mir-28-P2
Cpo-Mir-28-P2
Dno-Mir-28-P2
Ete-Mir-28-P2
Hsa-Mir-28-P2
Mmu-Mir-28-P2
Ocu-Mir-28-P2
Rno-Mir-28-P2
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(rheMac8_trace) |
chr8: 139957652-139957708 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAAAGAUGACUAAAACACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUGGUCAUACUCACCUCGGUGUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCAAAGAUGACUAAAAC--| U C CA UGUCU
ACU UUCCUG CCUCGAGGAGCU CAGUCUAGUA C
UGG AGGGAC GGAGUUCCUCGA GUCAGAUCAU A
GUUGUGGCUCCACUCAUAC^ U A A- CCCCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | The highest expression of the 3p arm has a 1 nt addition of an "A." However when seen the 3' offset reads suggests that this is the correct Drosha cut. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Mature sequence |
Mml-Mir-28-P2_5p |
| mirBase accession | MIMAT0006212 |
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| Sequence |
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-151-5p
|
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| Co-mature sequence |
Mml-Mir-28-P2_3p |
| mirBase accession | MIMAT0006213 |
|---|
| Sequence |
36- CUAGACUGAAGCUCCUUGAGG -57
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-151-3p
|
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