MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-16-2
Paralogues Mml-Mir-15-P1a  Mml-Mir-15-P1b  Mml-Mir-15-P1c  Mml-Mir-15-P1d  Mml-Mir-15-P2a  Mml-Mir-15-P2c  Mml-Mir-15-P2d 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(rheMac8_trace)
chr2: 134308551-134308615 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2b)
Mir-15-P2b chr2: 134308551-134308615 [-] UCSC Ensembl
Mir-15-P1b chr2: 134308703-134308762 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGGAUGAACUGACAUACUUGUUCCACUCUAGCAGCACGUAAAUAUUGGCGUAGUGAAAUAUGUAUUAAACACCAAUAUUACUGUGCUGCUUCAGUGUGACAGGGAUAUAGCAACUAUUUUAUC
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Structure
        10          20        30         40        50        60  
UUUGGAUGAACUGACAUA--     UC    CU        -|   A      C  AGUGAAAU 
                    CUUGU  CACU  AGCAGCAC GUAA UAUUGG GU        \
                    GGACA  GUGA  UCGUCGUG CAUU AUAACC CA        A
CUAUUUUAUCAACGAUAUAG     GU    CU        U^   -      A  AAUUAUGU 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-15-P2b_5p

mirBase accessionMIMAT0002651
Sequence
0- UAGCAGCACGUAAAUAUUGGCGU -23
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Proposed targets TargetScanVert: mml-miR-16-5p
Star sequence

Mml-Mir-15-P2b_3p*

mirBase accessionMIMAT0031018
Sequence
42- ACCAAUAUUACUGUGCUGCUUCA -65
Get sequence
Proposed targets TargetScanVert: mml-miR-16-2-3p