MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-105-P2

Family name MIR-105 (all species)
Seed CAAAUGC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-105-1
Paralogues Mml-Mir-105-P1 
Orthologues Bta-Mir-105-P2  Cfa-Mir-105-P2  Hsa-Mir-105-P2  Ocu-Mir-105-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 146009457-146009515 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P2)
Mir-105-P2 chrX: 146009457-146009515 [-] UCSC Ensembl
Mir-105-P1 chrX: 146011649-146011707 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGUUGCAGAACCUGAGUGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUCAUGCACCACGGAUGUUUGAGCAUGUGCUACGGUGUCUACUUUUGCUACAUUGCCGUCU
Get precursor sequence
Structure
        10          20        30        40        50         
UCUGUUGCAGAACCUGA--|  U         U  A          UC        GCUG 
                   GUG GCAUCGUGG CA AUGCUCAGAC  CUGUGGUG    C
                   CAU UGUGGCAUC GU UACGAGUUUG  GGCACCAC    U
UCUGCCGUUACAUCGUUUU^  C         -  G          UA        GUAC 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-105-P2_5p

mirBase accessionMIMAT0002454
Sequence
0- UCAAAUGCUCAGACUCCUGUGGUG -24
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Proposed targets TargetScanVert: mml-miR-105-5p
Star sequence

Mml-Mir-105-P2_3p*

mirBase accessionMIMAT0026583
Sequence
36- CCACGGAUGUUUGAGCAUGUGCU -59
Get sequence
Proposed targets TargetScanVert: mml-miR-105-3p