MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7371-P3

Family name MIR-7371 (all species)
Seed CUUUGUA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7371c
Paralogues Mdo-Mir-7371-P1  Mdo-Mir-7371-P2a  Mdo-Mir-7371-P2b  Mdo-Mir-7371-P4  Mdo-Mir-7371-P5  Mdo-Mir-7371-P6  Mdo-Mir-7371-P7  Mdo-Mir-7371-P8-v1  Mdo-Mir-7371-P8-v2  Mdo-Mir-7371-P9  Mdo-Mir-7371-P10  Mdo-Mir-7371-P11a  Mdo-Mir-7371-P11b  Mdo-Mir-7371-P11c  Mdo-Mir-7371-P12  Mdo-Mir-7371-P13  Mdo-Mir-7371-P14  Mdo-Mir-7371-P15  Mdo-Mir-7371-P16  Mdo-Mir-7371-P17  Mdo-Mir-7371-P18  Mdo-Mir-7371-P19-v1  Mdo-Mir-7371-P19-v2  Mdo-Mir-7371-P20  Mdo-Mir-7371-P21  Mdo-Mir-7371-P22  Mdo-Mir-7371-P23  Mdo-Mir-7371-P24  Mdo-Mir-7371-P25  Mdo-Mir-7371-P26  Mdo-Mir-7371-P27  Mdo-Mir-7371-P28  Mdo-Mir-7371-P29  Mdo-Mir-7371-P30  Mdo-Mir-7371-P31  Mdo-Mir-7371-P32  Mdo-Mir-7371-P33  Mdo-Mir-7371-P34  Mdo-Mir-7371-P35  Mdo-Mir-7371-P36  Mdo-Mir-7371-P37  Mdo-Mir-7371-P38  Mdo-Mir-7371-P39 
Orthologues Sha-Mir-7371-o3 
Node of Origin (locus) M. domestica
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
X: 38897274-38897334 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7371-P3)
Mir-7370 X: 38866830-38866888 [-] UCSC Ensembl
Mir-7371-P1 X: 38895437-38895494 [-] UCSC Ensembl
Mir-7371-P2a X: 38896648-38896704 [-] UCSC Ensembl
Mir-7371-P3 X: 38897274-38897334 [-] UCSC Ensembl
Mir-7371-P4 X: 38897921-38897979 [-] UCSC Ensembl
Mir-7371-P5 X: 38898553-38898610 [-] UCSC Ensembl
Mir-7371-P6 X: 38899297-38899358 [-] UCSC Ensembl
Mir-7371-P7 X: 38901020-38901081 [-] UCSC Ensembl
Mir-7371-P8-v1 X: 38901553-38901612 [-] UCSC Ensembl
Mir-7371-P8-v2 X: 38901553-38901612 [-] UCSC Ensembl
Mir-7371-P2b X: 38902124-38902180 [-] UCSC Ensembl
Mir-7371-P9 X: 38902981-38903043 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUUUUUCCUUCUACUUACUUCCAUUGCCUUCUUUGUACCAGAUGCUUUGUUGUAUAAAUACCAUCAAAUAGAGCAUUCUUGUAUAAAGGAAGUUGUUGGAAGUAAAACACUGUACAUUGA
Get precursor sequence
Structure
        10        20         30        40         50          
ACUUUUUCCUUCUACUUA      UU-  C          C  -|         GUAUAAA 
                  CUUCCA   GC UUCUUUGUAC AG AUGCUUUGUU       \
                  GAAGGU   UG AGGAAAUAUG UC UACGAGAUAA       U
AGUUACAUGUCACAAAAU      UGU  A          U  U^         ACUACCA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7371-P3_5p

mirBase accessionMIMAT0028778
Sequence
0- UCUUUGUACCAGAUGCUUUGUU -22
Get sequence
Proposed targets TargetScanVert: mdo-miR-7371c-5p
Co-mature sequence

Mdo-Mir-7371-P3_3p

mirBase accessionMIMAT0028779
Sequence
39- UAGAGCAUUCUUGUAUAAAGGA -61
Get sequence
Proposed targets TargetScanVert: mdo-miR-7371c-3p