MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7360-P3f

Family name MIR-7360 (all species)
Seed UAUUGUA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7360-6
Paralogues Mdo-Mir-7360-P1a  Mdo-Mir-7360-P1b  Mdo-Mir-7360-P1c  Mdo-Mir-7360-P1d  Mdo-Mir-7360-P1e  Mdo-Mir-7360-P1f  Mdo-Mir-7360-P2a  Mdo-Mir-7360-P2b  Mdo-Mir-7360-P2c  Mdo-Mir-7360-P2d  Mdo-Mir-7360-P3a  Mdo-Mir-7360-P3b  Mdo-Mir-7360-P3c  Mdo-Mir-7360-P3d  Mdo-Mir-7360-P3e  Mdo-Mir-7360-P3g  Mdo-Mir-7360-P3h  Mdo-Mir-7360-P4 
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
Un: 75573205-75573263 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7360-P3f)
Mir-7360-P3h Un: 75566443-75566501 [-] UCSC Ensembl
Mir-7360-P3g Un: 75570507-75570565 [-] UCSC Ensembl
Mir-7360-P3f Un: 75573205-75573263 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGGGUAUUAGGAGGUUCUGAGGUCCCAUUCCUUUCUGUAGGUAUAAUAUUUUAAUAAAAAAUUAAAUAUUGUAUCACAGAUUGGACUGGGCCCUUUGACCAAUCAUCAUCAACUUAG
Get precursor sequence
Structure
        10          20        30        40        50         
UGGGGGUAUUAGGAGGU--| U    U    U   UU     A            UAAUA 
                   UC GAGG CCCA UCC  UCUGU GGUAUAAUAUUU     A
                   AG UUCC GGGU AGG  AGACA CUAUGUUAUAAA     A
GAUUCAACUACUACUAACC^ U    C    C   UU     -            UUAAA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7360-P3f_5p* (predicted)

mirBase accessionMIMAT0028732
Sequence
0- UCCUUUCUGUAGGUAUAAUAUUU -23
Get sequence
Proposed targets TargetScanVert: mdo-miR-7360-5p
Mature sequence

Mdo-Mir-7360-P3f_3p

mirBase accessionMIMAT0028733
Sequence
37- AUAUUGUAUCACAGAUUGGACU -59
Get sequence
Proposed targets TargetScanVert: mdo-miR-7360-3p