MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7360-P3a

Family name MIR-7360 (all species)
Seed UAUUGUA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7360-1
Paralogues Mdo-Mir-7360-P1a  Mdo-Mir-7360-P1b  Mdo-Mir-7360-P1c  Mdo-Mir-7360-P1d  Mdo-Mir-7360-P1e  Mdo-Mir-7360-P1f  Mdo-Mir-7360-P2a  Mdo-Mir-7360-P2b  Mdo-Mir-7360-P2c  Mdo-Mir-7360-P2d  Mdo-Mir-7360-P3b  Mdo-Mir-7360-P3c  Mdo-Mir-7360-P3d  Mdo-Mir-7360-P3e  Mdo-Mir-7360-P3f  Mdo-Mir-7360-P3g  Mdo-Mir-7360-P3h  Mdo-Mir-7360-P4 
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
X: 66816074-66816132 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7360-P3a)
Mir-7360-P3e X: 66802580-66802638 [+] UCSC Ensembl
Mir-7359-P1c X: 66803745-66803801 [+] UCSC Ensembl
Mir-7360-P4 X: 66805279-66805337 [+] UCSC Ensembl
Mir-7359-P1b X: 66806444-66806500 [+] UCSC Ensembl
Mir-7360-P3d X: 66807977-66808035 [+] UCSC Ensembl
Mir-7359-P2c X: 66809142-66809197 [+] UCSC Ensembl
Mir-7360-P3c X: 66810676-66810734 [+] UCSC Ensembl
Mir-7359-P2b X: 66811841-66811896 [+] UCSC Ensembl
Mir-7360-P3b X: 66813375-66813433 [+] UCSC Ensembl
Mir-7359-P2a X: 66814540-66814595 [+] UCSC Ensembl
Mir-7360-P3a X: 66816074-66816132 [+] UCSC Ensembl
Mir-7359-P1a X: 66817218-66817274 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGCGUAUUAGGAGGUUCUCAGGUCCCAUUCCUUUCUGUAGGUAUAAUAUUUUAAUAAAAAAUUAAAUAUUGUAUCACAGAUUGGACUGGGCCCUUUGACCAAUCAUCAUCAACUUAG
Get precursor sequence
Structure
        10          20        30        40        50         
UGGGCGUAUUAGGAGGU--| UC   U    U   UU     A            UAAUA 
                   UC  AGG CCCA UCC  UCUGU GGUAUAAUAUUU     A
                   AG  UCC GGGU AGG  AGACA CUAUGUUAUAAA     A
GAUUCAACUACUACUAACC^ UU   C    C   UU     -            UUAAA 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7360-P3a_5p* (predicted)

mirBase accessionMIMAT0028732
Sequence
0- UCCUUUCUGUAGGUAUAAUAUUU -23
Get sequence
Proposed targets TargetScanVert: mdo-miR-7360-5p
Mature sequence

Mdo-Mir-7360-P3a_3p

mirBase accessionMIMAT0028733
Sequence
37- AUAUUGUAUCACAGAUUGGACU -59
Get sequence
Proposed targets TargetScanVert: mdo-miR-7360-3p