MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7359-P1b

Family name MIR-7359 (all species)
Seed AGAAUGU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7359a-2
Paralogues Mdo-Mir-7359-P1a  Mdo-Mir-7359-P1c  Mdo-Mir-7359-P2a  Mdo-Mir-7359-P2b  Mdo-Mir-7359-P2c 
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
X: 66806444-66806500 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7359-P1b)
Mir-7360-P3e X: 66802580-66802638 [+] UCSC Ensembl
Mir-7359-P1c X: 66803745-66803801 [+] UCSC Ensembl
Mir-7360-P4 X: 66805279-66805337 [+] UCSC Ensembl
Mir-7359-P1b X: 66806444-66806500 [+] UCSC Ensembl
Mir-7360-P3d X: 66807977-66808035 [+] UCSC Ensembl
Mir-7359-P2c X: 66809142-66809197 [+] UCSC Ensembl
Mir-7360-P3c X: 66810676-66810734 [+] UCSC Ensembl
Mir-7359-P2b X: 66811841-66811896 [+] UCSC Ensembl
Mir-7360-P3b X: 66813375-66813433 [+] UCSC Ensembl
Mir-7359-P2a X: 66814540-66814595 [+] UCSC Ensembl
Mir-7360-P3a X: 66816074-66816132 [+] UCSC Ensembl
Mir-7359-P1a X: 66817218-66817274 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGCUUAUAACCCUUUGAAUAUUGUGUCUUAGAAUGUGAAAGGCCAUUAGACAUUUUUGUUUCUCAUAGCCUUUCACAUUCUUAGAGACGAUAUUUCGAGUACAUCGUGAAUAUUG
Get precursor sequence
Structure
        10           20        30        40        50       
ACUGCUUAUAACCCUUU---|        G   U              C  U   CAUU 
                    GAAUAUUGU UCU AGAAUGUGAAAGGC AU AGA    U
                    UUUAUAGCA AGA UCUUACACUUUCCG UA UCU    U
GUUAUAAGUGCUACAUGAGC^        G   U              A  C   UUGU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7359-P1b_5p

mirBase accessionMIMAT0028730
Sequence
0- UAGAAUGUGAAAGGCCAUUAGA -22
Get sequence
Proposed targets TargetScanVert: mdo-miR-7359-5p
Star sequence

Mdo-Mir-7359-P1b_3p*

mirBase accessionMIMAT0028731
Sequence
34- UCAUAGCCUUUCACAUUCUUAGA -57
Get sequence
Proposed targets TargetScanVert: mdo-miR-7359a-3p