MirGeneDB 2.1

MirGeneDB ID

Lan-Mir-1989-P2

Family name MIR-1989 (all species)
Seed CAGCUGU
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-1989-P1  Lan-Mir-1989-P3 
Orthologues Cgi-Mir-1989  Cte-Mir-1989  Lgi-Mir-1989  Npo-Mir-1989  Sme-Mir-1989 
Node of Origin (locus) L. anatina
Node of Origin (family) Platytrochozoa
Genome context
(LinAna_1.0)
LFEI01000019: 478190-478247 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCACAAAAGAUGAGAGCGUUGCCACAUGUCAGCUGUCAUGAUGCCUUCUUGAGUGACAAACAAAGAAGGUGCAAUGUCUGCUGGCAUGUUGCAUUGUAAAAUUACUUUGUGACAAC
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Structure
        10          20        30        40        50        
GGGCACAAAAGAUGAGA--|  U   C          UGU   GA         GAGUG 
                   GCG UGC ACAUGUCAGC   CAU  UGCCUUCUU     A
                   UGU ACG UGUACGGUCG   GUA  GUGGAAGAA     C
CAACAGUGUUUCAUUAAAA^  U   U          UCU   AC         ACAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
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Mature sequence

Lan-Mir-1989-P2_5p

mirBase accessionNone
Sequence
0- UCAGCUGUCAUGAUGCCUUCUU -22
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Star sequence

Lan-Mir-1989-P2_3p* (predicted)

mirBase accessionNone
Sequence
36- GAAGGUGCAAUGUCUGCUGGCA -58
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