Mir-506-P8

MirGeneDB ID

Hsa-Mir-506-P8

Family name

MIR-506 (all species)

Seed

UCUCAAG

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-514b

Paralogues

Hsa-Mir-506-P1 Hsa-Mir-506-P2 Hsa-Mir-506-P3 Hsa-Mir-506-P4a1 Hsa-Mir-506-P4a2 Hsa-Mir-506-P4b Hsa-Mir-506-P5 Hsa-Mir-506-P6a1 Hsa-Mir-506-P6a2 Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P7a Hsa-Mir-506-P7b Hsa-Mir-506-P7c Hsa-Mir-506-P9 Hsa-Mir-506-P10 Hsa-Mir-506-P11 Hsa-Mir-506-P12 Hsa-Mir-506-P13 Hsa-Mir-506-P29

Orthologues

Cpo-Mir-506-o8 Mml-Mir-506-P8

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 147250161-147250218 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-506-P8)

Mir-506-P6a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P6a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P1 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2 chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P8 chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P4a2 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P4b chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P4a1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P5 chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P7a chrX: 147279266-147279323 [-] UCSC Ensembl
Mir-506-P7c chrX: 147281957-147282014 [-] UCSC Ensembl
Mir-506-P7b chrX: 147284655-147284712 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUUAAGUGUUCUAUUCUUCAUGUGGUACUCUUCUCAAGAGGGAGGCAAUCAUGUGUAAUUAGAUAUGAUUGACACCUCUGUGAGUGGAGUAACACAUGAUAUAUACAUCAUAUGACAU

Get precursor sequence

Structure

        10          20        30         40        50        
CUUAAGUGUUCUAUUCU--       G      U    -|    GAGG       GUGUA 
                   UCAUGUG UACUCU CUCA AGAGG    CAAUCAU     A
                   AGUACAC AUGAGG GAGU UCUCC    GUUAGUA     U
UACAGUAUACUACAUAUAU       A      U    G^    ACA-       UAGAU 
      110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-506-P8_5p

mirBase accession

MIMAT0015087

Sequence

0- UUCUCAAGAGGGAGGCAAUCAU -22

Get sequence

Proposed targets

microrna.org: MIMAT0015087
TargetScanVert: hsa-miR-514b-5p
TargetMiner: hsa-miR-514b-5p
miRDB: MIMAT0015087

Star sequence

Hsa-Mir-506-P8_3p*

mirBase accession

MIMAT0015088

Sequence

37- AUUGACACCUCUGUGAGUGGA -58

Get sequence

Proposed targets

microrna.org: MIMAT0015088
TargetScanVert: hsa-miR-514b-3p
TargetMiner: hsa-miR-514b-3p
miRDB: MIMAT0015088