Mir-506-P7c

MirGeneDB ID

Hsa-Mir-506-P7c

Family name

MIR-506 (all species)

Seed

UUGACAC

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-514a-3

Paralogues

Hsa-Mir-506-P1 Hsa-Mir-506-P2 Hsa-Mir-506-P3 Hsa-Mir-506-P4a1 Hsa-Mir-506-P4a2 Hsa-Mir-506-P4b Hsa-Mir-506-P5 Hsa-Mir-506-P6a1 Hsa-Mir-506-P6a2 Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P7a Hsa-Mir-506-P7b Hsa-Mir-506-P8 Hsa-Mir-506-P9 Hsa-Mir-506-P10 Hsa-Mir-506-P11 Hsa-Mir-506-P12 Hsa-Mir-506-P13 Hsa-Mir-506-P29

Orthologues

Cfa-Mir-506-P7 Cpo-Mir-506-o7c Mmu-Mir-506-P7 Rno-Mir-506-P7

Node of Origin (locus)

H. sapiens

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 147281957-147282014 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-506-P7c)

Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P8 chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P4a2 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P4b chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P4a1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P5 chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P7a chrX: 147279266-147279323 [-] UCSC Ensembl
Mir-506-P7c chrX: 147281957-147282014 [-] UCSC Ensembl
Mir-506-P7b chrX: 147284655-147284712 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCAUCCUUAAACAUGUUGUCUGUGGUACCCUACUCUGGAGAGUGACAAUCAUGUAUAACUAAAUUUGAUUGACACUUCUGUGAGUAGAGUAACGCAUGACACUUACGACAGACAAUGG

Get precursor sequence

Structure

        10         20         30         40        50        
CCAUCCUUAAACAUGUU-   -    G   C      -|   G    A      UGUAUA 
                  GUC UGUG UAC CUACUC UGGA AGUG CAAUCA      A
                  CAG ACGC AUG GAUGAG GUCU UCAC GUUAGU      C
GGUAACAGACAGCAUUCA   U    A   A      U^   -    A      UUAAAU 
      110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-506-P7c_5p*

mirBase accession

MIMAT0022702

Sequence

0- UACUCUGGAGAGUGACAAUCA -21

Get sequence

Proposed targets

TargetScanVert: hsa-miR-514a-5p
TargetMiner: hsa-miR-514a-5p
miRDB: MIMAT0022702

Mature sequence

Hsa-Mir-506-P7c_3p

mirBase accession

MIMAT0002883

Sequence

37- AUUGACACUUCUGUGAGUAGA -58

Get sequence

Proposed targets

microrna.org: MIMAT0002883
TargetScanVert: hsa-miR-514a-3p
TargetMiner: hsa-miR-514a-3p
miRDB: MIMAT0002883