Mir-506-P2

MirGeneDB ID

Hsa-Mir-506-P2

Family name

MIR-506 (all species)

Seed

UUUGCAC

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-507

Paralogues

Hsa-Mir-506-P1 Hsa-Mir-506-P3 Hsa-Mir-506-P4a1 Hsa-Mir-506-P4a2 Hsa-Mir-506-P4b Hsa-Mir-506-P5 Hsa-Mir-506-P6a1 Hsa-Mir-506-P6a2 Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P7a Hsa-Mir-506-P7b Hsa-Mir-506-P7c Hsa-Mir-506-P8 Hsa-Mir-506-P9 Hsa-Mir-506-P10 Hsa-Mir-506-P11 Hsa-Mir-506-P12 Hsa-Mir-506-P13 Hsa-Mir-506-P29

Orthologues

Bta-Mir-506-P2f Bta-Mir-506-P2g Bta-Mir-506-P2h Cfa-Mir-506-P2d Cfa-Mir-506-P2e Cpo-Mir-506-o2 Cpo-Mir-506-P2a Cpo-Mir-506-P2b Cpo-Mir-506-P2c Dno-Mir-506-P2 Mml-Mir-506-P2 Mmu-Mir-506-P2 Ocu-Mir-506-P2 Rno-Mir-506-P2

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 147231002-147231059 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-506-P2)

Mir-506-P6c chrX: 147189717-147189774 [-] UCSC Ensembl
Mir-506-P6b chrX: 147199057-147199114 [-] UCSC Ensembl
Mir-506-P6a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P6a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P1 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2 chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P8 chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P4a2 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P4b chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P4a1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P5 chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P7a chrX: 147279266-147279323 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACAUUUUCCGCUGUGCUGUGUGUAGUGCUUCACUUCAAGAAGUGCCAUGCAUGUGUCUAGAAAUAUGUUUUGCACCUUUUGGAGUGAAAUAAUGCACAACAGAUACAAGUCAGAACUA

Get precursor sequence

Structure

        10          20        30        40        50        
ACAUUUUCCGCUGUGCUG--|     G  C            A    CAU   UGUGUC 
                    UGUGUA UG UUCACUUCAAGA GUGC   GCA      U
                    ACACGU AU AAGUGAGGUUUU CACG   UGU      A
AUCAAGACUGAACAUAGACA^     A  A            C    UUU   AUAAAG 
      110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-506-P2_5p*

mirBase accession

None

Sequence

0- CACUUCAAGAAGUGCCAUGCA -21

Get sequence

Mature sequence

Hsa-Mir-506-P2_3p

mirBase accession

MIMAT0002879

Sequence

37- UUUUGCACCUUUUGGAGUGAA -58

Get sequence

Proposed targets

microrna.org: MIMAT0002879
TargetScanVert: hsa-miR-507
TargetMiner: hsa-miR-507
miRDB: MIMAT0002879